Detail



ID : Ahg321769

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321769|fgenesh1_pm.C_scaffold_4001826
Sequence
ATGAGCTCAA CTGTTTCAAA TCCCCAAGGA ATCCTGCAAC AAGGTGGTTA CAGTGGTCAT GACTCCCGCA GTAACATCAC CTCTGGTTCA GAATCAGAAT CTATTAACAA CGAGGAAGCA GAGTTGGTTT CTGTGTGTTG GAATCAGGAT TCAAGTTGTT TTGCAGCTGG AACGAGTCAT GGTTTTCGTA TATATAACTG TCAACCTTTC AAGGAAACTT TCAGGCGTGA GCTAAAGAAC GGCGGTTTTA AAATTGTAGA GATGCTTTTC CGAAGCAATA TATTGGCACT TGTTGGTGGT GGACCTAACT CTCAGTACCC TTCAAACAAA GTACTAATTT GGGATGATCA TCAGAGCCGT TGCATCAGTG AATTTGCATT TAGGTCTGAG ATTCGTGCTG TGAAATTAAG AAGGGATCGG ATTGTTGTTG TTCTTGAACA TAAGATTTAT GTTTACAATT TTATGGACCT TAGACTTCTT CATCAGATTG AAACCCAAGC TAATCCTAGA GGATTATGTT GCCTTTCTCA TCATTCTAAT ACGTCTGTGC TCGCTTGCCC CGGTCTTCAT CGAGGAGAGA TTCGAGTTGA ACATTTCGGG CTTAACATGG TACAAATCAT AAATGCTCAT GATTCTAGTA TTGCGTGTAT GACTTTGACA TTGGATGGTT TGTTGCTCGC AACTGCTAGT ACAAAGGGAA CTCTGATTAG AATCTTCAAC ACTATGGACG GAACTCGTTT GCAAGAGGTA CGAAGAGGAG TGGACAGAGC AGATATTTAT AGCATTGCAC TTTCACCAAA CGTGCAGTGG CTGGCTGTAT CAAGCGACAA GGGGACTGTT CACATTTTCT CTCTTAGAGT TAGGGTAGTT GGGGAGGATT CTTATTCCAC TGAAAATGCA GCTCTCCTGA CACAACAAAC TTATTCTACT TCTCTGCAAG GCCTTGTTTC TCCAACCACT GGTACCAATC CCGGTTCGTC ATTGTCGTTT ATGAGAGGTG TTCTACCAAA GTATTTCAGC TCGGAATGGT CATATGCACA GTTTCATGTA TCAGAAGTCA CACAATTCTT CGCAGCATTT GGCAGTAACA ACACGGTTGC TATTATCGGC ATGGATGGAA GTTTTTACAG ATGCAGCTTT GATCCCGTGA ACGGAGGAGA GATGGGGCAA CTGGAATATT TCCACTTTCT GAAGACGGAC AACCGCCGGA GATAA 
Length1215
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18885576.. 18887379
Download Sequence
A.thaliana
AGI-codeAT2G40810.1
Descriptionhomolog of yeast autophagy 18C
TAIR curator summary
Alias[ATATG18C][ATG18C][homolog of yeast autophagy 18C]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg476537
7.93725 Ahg933474
8.18535 Ahg477560 ADP-ribosylation factor B1C
8.66025 Ahg477863 Drought-responsive family protein
15.0333 Ahg940789 Tetratricopeptide repeat (TPR)-like superfamily protein
21 Ahg932001
21.6333 Ahg944316
24.2487 Ahg941333 APR-like 7
24.8596 Ahg945769 RING/U-box superfamily protein
26.4953 Ahg950248
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression