Detail



ID : Ahg477560

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|477560|fgenesh2_kg.3__261__AT3G03120.1
Sequence
AGAACCCATT GTACCGAAAA CGCAACCTTT GCTTTCTCGG GAAACTCTTC AATTCCTGGG AGAAATCGAT CATCTTAGCT TCTGATTCTC TCTGTTTTCT TCAGTTTCAA TTTCTTATTT TGGTTTGTCG ATAAGAGAAA GTAAAATACT TCTTGTGAGG GTTTAAGCTT TTTTTGGGTG AGAGATGGGT CAAACTTTTC GCAAGCTTTT CGATACTTTC TTCGGCAACC AGGAGATGAG GGTCGTTATG CTGGGTCTGG ATGCGGCTGG CAAAACAACC ATACTGTACA AGCTCCACAT AGGAGAAGTT CTGTCAACTG TTCCCACAAT CGGTTTCAAT GTTGAGAAAG TTCAGTACAA GAATGTCATG TTCACAGTTT GGGATGTTGG TGGCCAAGAG AAGCTGAGGC CCTTGTGGAG GCATTACTTC AATAATACCG ATGGACTTAT ATACGTGGTA GACTCCTTGG ACCGAGAGAG GATTGGTAAA GCCAAACAAG AATTTCAGGA TATCATAAGA GACCCATTCA TGCTCAACAG TGTCATTCTA GTGTTTGCAA ACAAACAAGA CATGAGAGGA GCCATGTCTC CTCGAGAAGT ATGTGAAGGG CTTGGCTTAC TTGATCTCAA GAACAGGAAA TGGCATATAC AAGGCACATG TGCTCTTCAA GGAGATGGGC TCTATGAAGG CTTAGACTGG TTATCCGCTA CACTCAAAGA GGTTAAAGCC GCTGGTTACT CATCAGTTGG TCCCTCGTTT TAGCTCTCTC CATTTGCAAA GAAAAAAATC CCTGACTAGC TAAATTGACA TACGAAAGTA CCAAATCAAG CTCATGGTGT CTCCTGTCTA CTCACCATTA TATACTTTAG ATCCATGGCC ACACTCTTCT TCTTGGCCGG TAATATCACA AAATGAAAAT CTCTCAAAAC TTTTGTAATG GAATTGTTTT TCTTTTTCTT TTGTCTTCAC ATGGCTTTGC TTCTGAAAGC TAATGTTAGT ATCAACTAGG CTCCTTTTTG CATAATATGA CTTTGGAGCT TCACTGTAAA TTCTGATGGA TAAATGTATA AATCTGCAAA ATTCTCATGA GATTGTTAAA GTGTCCCTTA TAGCTATAAT AGATGATTGA TCTTT 
Length1135
Protein Sequence
Protein Residue
Map Locationscaffold_3: 867928.. 870075
Download Sequence
A.thaliana
AGI-codeAT3G03120.1
DescriptionADP-ribosylation factor B1C
TAIR curator summaryA member of ARF GTPase family. A thaliana has 21 members of this family, known to be essential for vesicle coating and uncoating and functions in GTP-binding. Gene encoding ADP-ribosylation factor and similar to ADP-ribosylation factor 1; ARF 1 (GP:385340) {Drosophila melanogaster}, other ARFs and ARF-like proteins.
Alias[ARFB1C][ATARFB1C][ADP-ribosylation factor B1C]
Gene coexpression
MR
MR Locus Description
8.18535 Ahg321769 homolog of yeast autophagy 18C
20.4695 Ahg496280 glucuronidase 1
36 Ahg492639 Protein of unknown function (DUF3537)
37.229 Ahg935056 Protein with RING/U-box and TRAF-like domains
37.7889 Ahg921275 RING/U-box protein with domain of unknown function (DUF 1232)
37.8946 Ahg943990 RAB GTPase homolog H1C
41.4005 Ahg322779 Protein of unknown function (DUF707)
47.7179 Ahg485135 ATP-binding cassette A2
47.9583 Ahg929072 Transducin/WD40 repeat-like superfamily protein
53.7773 Ahg892853
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression