Detail



ID : Ahg322062

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|322062|fgenesh1_pm.C_scaffold_4002119
Sequence
ATGGCTGATC AACAAACCCT AGATTCGTCT ACTCCTCCTA CTCAATCCGA TGATCTATCT CACTCCCACT CTACTTCCTC TACTACTTCA GCTTCTTCTT CATCAGATCC ATCGCTCTTA AGGTCTCTCT CCTTAAGTCG ACTCAACGCC GGAGCTCCTG AGTTCGTTCC TGGTCGAACT ACTCCTCCGC TACCTCAACC TCCGAGGATG ATTATCCCAC CTCCTCCACC GCACGGTATG CTTCATATGT ATCACCACCA GCCTCCTTTC AATACTCCGG TTCTTGGTCC TGTTCCAATC CAGCCTCACT TGGTCCCTGT TCAAAACCAT CATCCTCATC ATCGCTTTCA TCATCATCAC AATCGTCATC AGAATCAGCA ATATGTTCCG GTGAGGAATC ACGGAGATTA TCAGCAGCGT GGTGGTGACC AGGAACCGGA TTTGGTTCCG AAGAAGAACG ATCGGAGAGA TCATAGTAAG AGAGAATCTA AGACCGATCA AGCTACTGAA ACTGGAGCTT CTGTTTCTAT TGATTCTAAA ACTGGTTTAC CTGAAGATTC TATCCAGAAG ATTGTGAATC AGGTTGAATA CTATTTCAGT GACTTGAACT TGGCGACAAC AGATCATCTC ATGAGATTCA TTTGCAAGGA TCCTGAAGGA TATGTGCCTA TTCATGTTGT TGCATCGTTC AAGAAAATTA AAGCTGTCAT TAACAGTAAT TCTCAGCTTG CCGCAGTGCT ACAGAACTCA GCAAAGCTTT TTGTTAGTGA AGATGGAAAG AAAGTGAGAC GCATAAATCC GATCACTGAG TCTGCTATAG AAGAGCTCCA GTCTCGCATT ATTATTGCTG AGAATCTACC TGAGGATCAT TGCTACCAAA ATCTGATGAA GATTTTCTCA ACTGTTGGAA GTGTGAAGAA CATCCGTACC TGCCAGCCAC AAAATAATGG AAGCAGTGCT CCACCCGCAG CAAGATCAGC AGCCAAAAGC GATGGTACGC TTTTCAGTAA CAAGGTCCAT GCTTTTGTTG AGTATGAGAT GGTTGAACTA GCCGAGAAAG CAGTTGCCGA GTTAAATGAA GCGGGAAATT GGAGGAGCGG TCTTAAAGTC CGGTTGATGC TAAAGAATCA GATAAAGGAA CCAAAACAAG GTCAAGGGCG AGGAAGAAAA GGACATGATG CAGAAGTAGA ACATGAGGAA GATGATGCTA CAACATCCGA GCAGCAGCCG ATTGAGAAAC AATCTGAAGA GTGTTCTGGG GAATGGGATA CACATATGCA AGAGCAGCCA ATAATAGGAG AGGATCAAGG GAATGAGAAA GCGGGTGGAC AGAGAAAAGG GCGTAACAGA GGTAGAGGAA AGGGACGAGG ACGAGGTCAA CCACACCAGA ACCAGAACCA GAACAACAAC CACAGCCACA ACCACTACCA CAATGGGAGA GGAAATCATC ATCATCAAGT GGGAACACCA CCTTCAAACA ATCCAATGAA CAACATGGAG CAACCAGGCA TGGGGAAGCA GCAACCACCT GGACCACGAA TGCCTGATGG GACGAGAGGA TTCTCGATGG GACGGGGAAA GCCGGTCATG GTTCAGGCAG AGTGA 
Length1605
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20380153.. 20382618
Download Sequence
A.thaliana
AGI-codeAT2G43970.1
DescriptionRNA-binding protein
TAIR curator summary
Alias[AtLARP6b][LARP6b][La related protein 6b]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg948913 thioredoxin 3
6.245 Ahg481806 CAX interacting protein 4
6.48074 Ahg482229 TRAF-like family protein
6.63325 Ahg492886 phloem protein 2-A1
8 Ahg496641 FK506-binding protein 12
8 Ahg913857
8.94427 Ahg946655 Papain family cysteine protease
9.53939 Ahg473395 Transcription elongation factor (TFIIS) family protein
10.4881 Ahg491157 ascorbate peroxidase 3
10.583 Ahg488799 Aluminium induced protein with YGL and LRDR motifs
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression