Detail



ID : Ahg323006

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|323006|fgenesh1_pm.C_scaffold_5000550
Sequence
ATGGATACGA TGCGTATCTC CGGTGTATCG ACCGGAGCTG AGATTTTAGT ACAATGCAAT TCCTTATCTA GCCTCGTTTC TCGTCGTTGC GACGACGGAA GATTGAGAAC AAGAATGTTT CCGGCGAGAA GCAGAAACTG GCGTCCATCG CCGACGAGAA GGTCGTTTTT ATCGGTGAAA TCTGTCTCTA GCGAACCAAA GGCGAAAGTA ACCGATGCAG TTCTCGATTC CGAACAAGAA GTGTTTAGCT CGATGAATCC GTTTGCGCCA GATGCTGCTT CGGTAGCTTC GAGTATCAAG TACCATGCTG AGTTTACGCC ATTGTTTTCT CCGGAGAAGT TTGAGTTGCC AAAGGCGTTT TTCGCGACTG CGCAGAGTGT TAGAGACGCT TTGATCATGA ATTGGAATGC AACTTATGAG TATTACAATA GGGTGAATGT GAAACAGGCG TATTATTTGT CAATGGAGTT TTTGCAGGGT AGAGCCTTAT CGAATGCAGT GGGTAATCTT GGGCTTAATA GCGCTTATGG TGACGCTTTG AAGAGGCTTG GTTTTGATTT GGAAAGTGTA GCTAGTCAGG AGCCAGATCC TGCACTTGGG AATGGTGGAC TCGGGAGACT TGCTTCATGC TTTTTGGATT CCATGGCAAC TTTGAATTAT CCGGCATGGG GTTATGGACT TAGATACAAG TATGGCTTGT TCAAACAGAG AATCACAAAA GATGGACAGG AGGAAGCTGC AGAAGATTGG CTTGAGCTAA GTAATCCTTG GGAAATAGTC AGAAATGATG TCTCATATCC TATTAAGTTC TATGGAAAAG TGGTTTTTGG ATCAGATGGT AAGAAACGGT GGATTGGTGG AGAAGACATA GTGGCTGTTG CTTATGATGT TCCTATACCT GGTTATAAAA CTAAGACTAC TATCAATCTA CGACTCTGGT CAACAAAAGC TCCATCAGAA GATTTTGATT TATCATCATA TAACTCCGGG AAGCATACTG AGGCAGCAGA AGCTCTATTC AATGCCGAAA AGATTTGTTT CGTGCTTTAC CCTGGAGATG AGTCAAATGA AGGAAAGGCT CTTCGTCTGA AGCAACAGTA CACTCTGTGT TCAGCCTCGC TACAAGATAT CTGTCAACTG GGAAGAATCC CAGAGAAGGT TGCAGTGCAG ATGAATGACA CTCACCCTAC TCTATGCATT CCCGAGCTAA TGAGGATTCT AATGGATTTG AAAGGACTAA GCTGGGAGGA TGCTTGGAAA ATTACACAAA GGACCGTGGC ATACACAAAC CATACAGTCT TGCCTGAGGC ACTGGAGAAG TGGAGTTTAG AACTTATGGA GAAATTGCTT CCTCGTCATG TAGAGATTAT AGAAAAGATT GACGAGGAGC TAGTTCGCAC AATTGTCTCT GAGTATGGCA CTGCGGATCC TGACTTACTC GAAGAGAAAC TGAAGGCAAT GAGGATCTTA GAAAACGTTG AGTTGCCTTC TGCCTTTGCA GATGTGATCG TGAAGCCGGA GAGCAAACCA GTAACTGCAA AAGATGCTCA AAATGGCGTG AAAACGGAAC AAGAAGAGGA AAAAATTGCT GGCGAGGAAG AGGAAGAGGA AGTTATCCCA GAACCAATAA AACCACCAAA GATGGTCCGT ATGGCCAACC TTGCTGTTGT GGGTGGTCAT GCTGTAAATG GGGTTGCAGA GATACACAGT GAAATAGTGA AGCAGGATGT GTTTAATGAT TTCGTTCAGT TGTGGCCGGA AAAATTTCAG AATAAAACCA ATGGAGTAAC ACCAAGGCGA TGGATTCGTT TTTGCAACCC ATATCTAAGT GATACTATAA CTAACTGGAT AGGCACAGAA GACTGGGTCT TAAACACCGA AAAGCTTGCG GAGCTGAGAA AGTTTGCAGA TAATGAAGAT CTTCAATCCG AGTGGAGGAC AGCAAAGAAG AAGAACAAGT TAAAGGTTGT AGCACTTATC AAGGAAAGAA CGGGATACAC TGTCAGCCCG GATGCAATGT TCGACATTCA GATCAAGCGT ATCCACGAGT ACAAGCGACA ACTGCTTAAT ATCTTGGGAA TTGTTTACCG CTACAAAAAG ATGAAGGAAA TGAGTGCCAG TGAGAGGGAG AAGGCATATG TTCCAAGAGT TTGCATATTT GGAGGAAAAG CATTCGCCAC ATATGTGCAA GCTAAGAGGA TTGTGAAATT CATCACAGAT GTTGCATCTA CAATTAACCA TGATCTGGAA ATAGGTGACC TGCTTAAGGT TATCTTTGTT CCTGATTACA ATGTCAGTGT TGCCGAACTG CTCATTCCAG CAAGTGAGCT TTCTCAGCAC ATCAGTACCG CTGGGATGGA AGCTAGTGGG ACAAGCAACA TGAAATTTTC GATGAACGGT TGCGTTTTGA TTGGAACCTT GGATGGGGCG AATGTCGAGA TTAGAGAAGA AGTAGGAGAA GAAAATTTCT TCCTTTTTGG TGCCAAAGCT GATGAGATTG TGAACCTCAG GAAGGAGAGA GCAGAGGGAA AGTTTGTTCC AGATCCTACT TTTGAAGAAG TCAAGAAGTT CGTTAGAAGC GGTGTCTTTG GCTCAAACAG CTATGATGAA CTAATTGGCT CTTTGGAAGG AAATGAAGGC TTTGGTCGAG CGGATTACTT CCTCGTTGGC AAAGACTTTC CTAGTTACAT TGAATGTCAA GAAAAAGTCG ACGAGGCATA CCGGGACCAG AAAAGATGGA CGAGAATGTC AATCTTGAAC ACAGCAGGTT CATTCAAGTT TAGCAGTGAC CGGACGATCC ATGAATACGC CAAAGACATT TGGAATATTA AGCAAGTCGA ACTTCCATGA 
Length2850
Protein Sequence
Protein Residue
Map Locationscaffold_5: 5301882.. 5306579
Download Sequence
A.thaliana
AGI-codeAT3G29320.1
DescriptionGlycosyl transferase, family 35
TAIR curator summaryEncodes a plastidic alpha-glucan phosphorylase. In vitro, the enzyme has a preference for maltooligosaccharides, such as maltoheptaose.
Alias[PHS1][alpha-glucan phosphorylase 1]
Gene coexpression
MR
MR Locus Description
1 Ahg492673 Peroxidase superfamily protein
2.44949 Ahg483146 disproportionating enzyme 2
3.4641 Ahg339218 alpha-amylase-like 3
3.4641 Ahg471553
3.4641 Ahg470308 debranching enzyme 1
4.47214 Ahg939752 starch branching enzyme 2.2
7.07107 Ahg930731
7.74597 Ahg483030 isoamylase 1
8 Ahg313369 phosphoenolpyruvate carboxylase 4
8 Ahg472181 dehydroascorbate reductase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression