| Annotation |
|---|
| Description | jgi|Araly1|470308|fgenesh2_kg.1__262__AT1G03310.2 |
| Sequence |
CTAAAGTTTT CGGCGCTTTG TCTAAACAAT GGCTGCTTGG TCACCATCAG GCATCACTAG AACATGGAAG TTTCCTGCTG CAAGGTTTTT TACTGGTAAG AACAAGATTA AACTTGGATC TGAGACACTG ATATTTACAA GAAAACGTTT CATGGGGGAT TTGGTTACTA GCGCGTTACA AAGTTATCAG TTGGGTAAGA TATGTGCTTC GAAGACTTCC ATCGAGCTGA GGGAGGCATT GTCTACTAGA AGAGCTCAGG TTGATGACCT GAAGAAGGTA ACATCATATT CATTCAGGAC AAAATCTGGT GCTCTTGTTA AAGTTAGAGT TGAAAAGAAG AGAGAAAAGT ACAGCATTAT GGTTTATGTC TCATCTTTGG AACTAAGTGG TGATGGCAAG AGTAGACTGG TGATGGTTTG GGGTGTCTAC AGGTCTGATT CTTCGTGTTT CTTGCCTCTG GATTTCGAAA ACTCTTCCCA AGACTCACAA ACCCACACAA CAGAAACTCC ATTTGTGAAA AGCTCCTTCT CTGAGTTAAT GCTAGGGCTC GAATTTGATG GGAAAGAATC TCCTTTCTAC CTATCATTTC ACCTGAAGTT AGTGTCAGGA AGAGATCCGG ACGGTCAAGA AATGCTGACA CACAGAGACA CTGACTTCTG TATCCCGGTT GGTTTTACTG CTGGTCATCC ATTGCCGTTA GGCCTTTCTT CTGGGCCAGA TGATGACTCT TGGAATTTTG CCTTCTTTTC AAGAAACTCA ACGAACGTGG TTTTATGCTT GTATGATGAT ACCACAACCG ATAAACCTGC TTTAGAGCTT GATCTTGATC CTTATGTCAA CCGAACAGGT GATGTTTGGC ATGCTTCAAT TGACAATACA TGGGATTTTG TGAGATATGG CTACCGTTGC AAGGAGACGG CTCACTCGGA AGAAGACGTC GATGTTGAAG CTGAGCCAAT TGTTTTGGAT CCATATGCCA CAGTCATTGG TAAATCTGTC TCTCAGAAAT TTCTTGGAAG TTTACTTAAG AACCCTTCTT TTGATTGGGG AGAAGATGTG TCTCCGAATA TACCTCTGGA GAAACTTATT GTTTACCGGT TGAATGTGAA GGGTTTTACA CAACACAAAT CCAGCAAGTT GCCTAGTAAC GTAGCAGGGA CTTTTTCTGG TGTAGATGAG AAAGTTAGCC ATCTGAAAAC CCTTGGAGTC AACGGTGTTC TCTTGGAGCC AATATTTTCG TTCTCCGAGC AAAAAGGTCC TTATTTTCCA TTTCATTTCT TTTCACCAAT GGACATATAT GGACCTTCCA ATAGCCTTGA ATCCGCGGTT AACTCAATGA AAGAGATGGT GAAGAAATTG CACAGTCAGG GAATAGAGGT ACTTTTGGAA GTAGTTTTTA CACATACCAC TGATTCTGGA GCTCTTCATG GAATTGATGA CAGTTGCTAT TATTACAAGG GAAGGGCCAA TGATCTAGAT TATAAAAGTT ACTTGAACTG TAACTATCCT GTTGTTCAGC AGTTGATTTT GGAGAGCTTG CGTTATTGGG TTACCGAGTT TCATGTAGAT GGTTTTTGTT TCATAAATGC TTCGTCTCTC TTGAGAGGCG TTCACGGTGA ACAGCTCTCT CGTCCTCCCT TGGTTGAAGC AATAACTTTC GATCCACTTC TTGCGGAAAC CAAACTAATT GCTGATTGTT GGGATCCACT TGAAATGATG CCAAAAGAAG TACGGTTCCC GCATTGGAAG CGATGGGCAG AACTCAACAC AAGATATTGT CGAAATGTAC GAAATTTTCT GAGGGGAAGA GGCGTTCTAA GCGATCTGGC TACAAGAATT TGTGGAAGTG GTGACATATT TACCGATGGA AGAGGTCCTG CTTTCTCCTT TAACTACATT TCAAGAAACT CAGGACTCTC TCTTGTTGAC TTAGTCAGTT TCAGTAACCC TGAGATAGCT TCAGAGCTAA GTTGGAATTG TGGGGAAGAA GGAGCAACGA ATAAATCAGC TGTTCTTCAA AGAAGGCTAA AACAAATCCG CAACTTCTTG TTTATACAGT ACATATCACT CGGAATTCCA GTGCTTAACA TGGGAGATGA ATGTGGAATC TCGACAAAGG GCTCGCCTTT GTTGGAATCA CGGAAACCTT TTGATTGGAA CTTGCTAGCT TCGGCTTTCG GCACACAGAT CACGCAATTC ATCTCCTTCA TGACTTCAGT AAGAGAAAGA AGAAGCGATG TGTTTCAGAG GAGAAACTTT TTGAAACCTG AAAATATTGT TTGGTATGCA AATGACCAAA CAACTCCAAA GTGGGAAGAT CCTACTTCTA AGTTTTTGGC ATTGGAGATC AAATCAGAGT CAGAGGAAGA GGAAACTGCA TCACTGGTTG AGCCAACTGA GCCAAAGAGC AATGATCTGT TCATCGGATT CAATGCAAGT GATCATCCGG AGAGTGTAAT CTTACCTTCA CTTCCCGATG GAAGCAAATG GAGACGATTG GTCGACACAG CTCTTCCTTT CCCGGGGTTT TTCTCTGTCG AAGGAGAGAC CGTTGTTGTA GCAGAAGAAC AGCTACAGCA ACTGATTGTG TATGAGATGA AGCCGTACAG TTGTACCCTT TTTGAAACCA TCAGTTCTAC TGCTTAGAAC TCAAGTTATG ATCTTTGTAT ATGTTATTGT GTTGTCATAT TTCCAATAAG AATATTCAAT TAAATCAATG ACTTCCACAA TATCTGATAT AGCAACATCA CTTGTGCCTT TTGCTTGT |
| Length | 2768 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 922285.. 925081 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G03310.2 |
| Description | debranching enzyme 1 |
| TAIR curator summary | Encodes a protein with strong similarity to isoamylase (EC:3.2.1.68) however lacks critical residues known to be important for activity. Appears to co localize with ISA1 in the chloroplast isoamylase complex. Mutations in this gene cause the loss of detectable isoamylase activity and the disruption of normal starch structure. It has been postulated that AtISA2 interacts with AtISA1 to form the Iso1 complex. |
| Alias | [AtBE2][ATISA2][BE2][DBE1][ISA2][ARABIDOPSIS THALIANA ISOAMYLASE 2][BRANCHING ENZYME 2][debranching enzyme 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg483030 | isoamylase 1 |
| 2.64575 |
Ahg479490 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 3.4641 |
Ahg323006 | Glycosyl transferase, family 35 |
| 5.19615 |
Ahg481003 | Kinesin motor family protein |
| 8.3666 |
Ahg939752 | starch branching enzyme 2.2 |
| 10.3923 |
Ahg921438 | spermidine synthase 1 |
| 10.4881 |
Ahg490316 | UDP-xylosyltransferase 2 |
| 11.4891 |
Ahg483146 | disproportionating enzyme 2 |
| 12.49 |
Ahg493370 | beta-amylase 5 |
| 14.4222 |
Ahg493171 | ureidoglycine aminohydrolase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|