| Annotation |
|---|
| Description | jgi|Araly1|323059|fgenesh1_pm.C_scaffold_5000603 |
| Sequence |
ATGGAAACAG CTTTGGAGGT GTACAATGAT ACTGAAACGA GGTCACCAGA AACACAACCA ATCAAGCGAC GCAAGAAGAA GTCGATGGTG TGGGAACATT TCACAATCGA GGCGGTGGAA CCGAATTGCA GAAGGGCTTT TTGCAAAGGA TGTAACCAGA GTTTTGCTTA TAGCAACGGT AACAAAGTGG CTGGTACTAG CCATCTTAAG CGTCACATTG CTAAGGGGAC ATGTCCTGCA CTTATCCATA CACAAGACAA TGACAACAAC CAGCTCATGA CTACTCCTTA CACTCCCAAG AGTGACACCC CGAGAAGGCG TTACCGAACC CAGACCCCTA GTCCTTTTGT TGCGTTTAAT CAGGACAAGT GTCGTCAAGA GATAGCTAAG ATGATCATTA TGCATGACTA CCCTCTTCAC ATGGTTCAGC ATCCAGGGTT CATCTCGTTC GTGCAGAGTA TTCAGCCTCA CTTTGATGCT GTGAGCTTTA ACAATGTTCA AGGAGACTGT GTGGCGACTT ACCTTGCAGA AAAGCAGAAT GTCATGAAGT CTTTAGAAGG GATTCCTGGA CGCTTCTGTC TAACGCTGGA CTTCTGGACG TCCAAGCTAA CTCTTGGGTA TGTGTTTATA ACTGCTCACT TCATTGACAG CGATTGGAAG ATACAAAAGA AGCTTCTCAA TGTTATGATG GAATCGTATC CAGAAGCTGA CGAAGCCTTG AGTCTTGTGG TTGCAAATTG TGTTTCTGAA TGGGGTCTTG AGGGAAAGTT GTTTTCTGTC ACCTTCAACC ATCCGGCGAG TAACTCTGCA GTTGAAAACA TCAGACCTCA ACTCTGCATC AAGAACCCTG GAATTCTGGA TGGTCAGTTG GTAATAGGGA ATTGTGTTGC CCGAACATTT AGTAGCCTCG CTAAAGATGT CCTGGAGAAA GGAAAAGATG TGATCAAGAA CATCCGGGAC AGTGTGAAGC ACGTGAAAAC CTCAGAGTCC CATGAGGAGA GGTTTATTGA GCTCAAGGAA CAGCTTCAAG TTCCAAGCGA GAAGGTACTT TCTCTTGATG ATCAGACGCA ATGGAACACA ACATATAAGA TGCTTGTGGC TGCTTCAGAA TTAAAGGAAG TGTTCTCGTG CTTAGACACT GCTGATCCTG ACTACAAGAA ACCTCCTTCA GCAGAGGATT GGAGGCATGT GGAGGCACTT TGCACATTCC TGAAGCCTCT TTTCGAAGCA GCCTCCACTC TTCAATCTAC TGGAAACCCA TCTGCTGTTA CCTTCTTTCA TGAAGTTTGG AAGACACAGT CAGATCTGTC TCGGGCAATT GCTGGAGAGG ATCCTTATGT CGCAGGTATT GCTAAAACCA TGAAAGATAA GGTTGACAAG TACTGGAGAG ACTGTAGCTT GGTTTTGGCA ATGGCGGTGG TGATGGATCC TCGGTTCAAG ATGAAGCTTG TCGAGTTCAG TTTCTCCAAG ATATTTGGAG AAGATGCTGG GAAGAACATC AAGACCGTGG ATGATGGGAT CCACGAGCTC TTCAGCGAAT ACATGGCGCT CCCATCGCCC CTAAAACCGA CATCTGAAGG TGGGAAAGCA GATGGACTGT CAGATTTTGA CACGTACATA ATGGAGACAA CGGGGCAGAA TCTGAAATCA GAGCTTGACC AGTACCTTGA TGAAACGCTG CTTCCCAGGG TTCAGGAGTT TGATGTTCTT GACTGGTGGA AACAGAACAA ACTCAAGTAC CCGACATTGT CGAAGATGGC TAGAGACATC CTCTCGATCC CGGTTTCAGC TGCAGCCTTT GACTATGTCT TTGACATGGA GCCAAGGGAG ATGGATGAGT ATAAGACGTC ACTGAGGCCC GAGACAGTGG AGGCTCTGAT TTGCGCGAGG GAATGGCTTC TCGAGAATGC TTCTTCTTCT GCAGCTGCGC AAATGGCAAG TGCTATCATC AAATCTGAAG CATAG |
| Length | 1965 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 8962113.. 8964077 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G42170.1 |
| Description | BED zinc finger ;hAT family dimerisation domain |
| TAIR curator summary | transposase-like gene with conserved domains from the family of hAT transposases that includes hobo from Drosophila melanogaster, Activator (Ac) from maize, and Tam3 from snapdragon but lacks several amino acids known to be essential for Ac transposition5. The DAYSLEEPER gene lacks 8 bp duplications and TIRs (a common feature of transcriptionally silent hAT transposases), however, DAYSLEEPER expression was detected, and several expressed sequence tags are available. The expression seems to be under the control of factors determining the circadian rhythm. DAYSLEEPER was isolated as a factor binding to a motif (Kubox1) present in the upstream region of the Arabidopsis DNA repair gene Ku70. Mutant plants lacking DAYSLEEPER or strongly overexpressing this gene do not develop in a normal manner. |
| Alias | [DAYSLEEPER][DAYSLEEPER] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.87298 |
Ahg480240 | Minichromosome maintenance (MCM2/3/5) family protein |
| 4.89898 |
Ahg479281 | Galactose mutarotase-like superfamily protein |
| 9.79796 |
Ahg488158 | no exine formation 1 |
| 10.583 |
Ahg485970 | O-Glycosyl hydrolases family 17 protein |
| 10.6771 |
Ahg943901 | phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative |
| 12 |
Ahg951196 | Glycosyl hydrolases family 31 protein |
| 12.0416 |
Ahg470784 | Protein kinase superfamily protein |
| 13.8203 |
Ahg921075 | Nucleotide-sugar transporter family protein |
| 24.2074 |
Ahg478516 | lysyl-tRNA synthetase 1 |
| 24.8193 |
Ahg494737 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|