Detail



ID : Ahg485970

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485970|fgenesh2_kg.5__1962__AT3G55430.1
Sequence
ACAATTATAC ACACGTATAC GCCTAGACAA AACGGTCATA TCTATTTATT TATTAATTTC TATTATAAAT AGTTTCTCGA TATCGTCATA ATAAAAACTC TACTCAAACG ATTCACGGGT TTCACTTGGA ATCGTTTGAT TTTCTCGTTT CCGAAATATA ATAAAAAAAT GGCCAAAGCG CCACCGTCAA TCTCTCTTCT CCTCCTCCTC TCCGCCGCCG TATTCCTCAC CATCCCCGCC GTGATCTCCG CCATCGGTGT TAACTATGGA ACTCTCGGGA ACCTTCCACC ACCGACTCAA GTGGCAAATT TCATCAAGAC TCAAACTTCG ATCGATAGCG TCAAGATCTT CGATGTGAAT CCCGATATCC TCCGTGCTTT CGCTGGAACT GGTATCTCCG TCGTCGTTAC CGTTCCTAAC GGCGATATTC CGGCGTTAGC TAACGGAAGA CAAGCTCGTC GGTGGGTTTC GGCTAACATT TTGCCGTTTC ATCCTCAGAC GAAGATTAAG TATATCTCTG TCGGAAATGA GATTTTGCTC ACCGGAGATA ATAATATGAT CAATAATCTC TTACCGGCGA TGAGGAATCT TAACAATGCT TTGGTTCGTG CTGGTGTCAG AGATGTTAAG GTCACAACCG CACACTCACT TAACATCATA GCCTATGACC TGACCGGTGC ACCTAGCAGC GGTAGATTCA GGCCGGGTTG GGACAAGGGC ATATTGGCTC CAATCCTAGC TTACCATCGC AGCACCAAGT CTCCTTTCAT GGTTAACCCG TACCCTTACT TTGGTTTTGA CCCTAAAAAC GTCAATTTCG CCATTTTCCG TACACCGTAC AAGGCAGTCC GTGACCCGTT CACCCGCCAT GTCTACACCA ACATGTTTGA TGCACTCATG GACTCGACTT ATTCTGCCAT GAAAGCTCTT GGATACGGTG ATGTTAACAT TGTCGTTGGT GAGACGGGCT GGCCTTCTGC TTGTGATGCA CCTTGGTGCT CGCCGGCTAA TGCTGCTTGG TTCAACCTCA ACATTATCAA ACGTGCACAA GGCCAAGGGA CACCTCTCAT GCCTAAAAGA AGGTTTGAGA CTTACATTTT CGGTCTCTTC AATGAAGAAG GCAAGCCCGG TCCGACCGCA GAGCGTAATT GGGGACTTTT CCGAGCAGAT TTCTCCCCGG TTTACGATGT TGGTCTTCTC CGAAACGGAC AAGGCGGTGG AGGCCGTCCA GCATTGCCCG CACCTAGTAC TGCCGGCGGT AAATGGTGTG TGGCCAGATC GGCGGCAACG AATGCACAGC TGCAAGACAA CATTAATTGG GTGTGTGGTC AGGGGGTTGA TTGTAAACCG ATCCAAGCTG GTGGTTCGTG CTTTAACCCG AGCAGTTTGA GGACGCACGC ATCTTTTGTT ATGAACGCTT ATTTCCAGAG CCACGGCCGC ACTGACGGTG CTTGTAATTT CAGTGGAACT GGTATGGTCG TAGGGAACAA CCCAAGCAAT GGTGCGTGTA AGTACTAAGA GATTGTCTAT GTCTATGTAG TAGCATTTGT CTGGAAAATC CTAACATAAT GGTTCTGAGG AACTTTGGAT TTGAGAGATC ATCAGATTTG TGTTTAATTT CGGATTATTC TAATTTTAAG GTTTTTTGTT AATTCTTTTT CCGTTAATTC CTTTTATTTA AACTAAATAA AGTGGAACTT CTCATAAATT TTGCTTCAGC GGTACGCTT 
Length1729
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16510281.. 16512854
Download Sequence
A.thaliana
AGI-codeAT3G55430.1
DescriptionO-Glycosyl hydrolases family 17 protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg496633 arabinogalactan protein 1
5.47723 Ahg929405 UDP-Glycosyltransferase superfamily protein
6 Ahg488011 arabinogalactan protein 15
6.48074 Ahg939360 xylosyltransferase 1
7.48331 Ahg912297 O-Glycosyl hydrolases family 17 protein
8.24621 Ahg477551 cellulose synthase-like D3
8.3666 Ahg495603 O-Glycosyl hydrolases family 17 protein
10.583 Ahg323059 BED zinc finger ;hAT family dimerisation domain
20.9762 Ahg902317 RmlC-like cupins superfamily protein
21.2368 Ahg944275 Pathogenesis-related thaumatin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression