Detail



ID : Ahg488208

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488208|fgenesh2_kg.6__1342__AT5G13840.1
Sequence
GCTAGGACCA AAGATCTGAC CGTTGGAGCA TGAACTCCAC AAATCTAATC AGATCCCGCT CCTATATACT ATTATATAAT CTCTCCCACC ACCGAAATTT GACCGTTGGA GAACATTACT CTTTGCAAAA GAAGGAAAAA AAAAGCTCTC TTTGATTCTT TTGCAATCTT CTCCTCTCAA TCTCTGACCA AACCAACACT TCCAGTGATT TTGAATAGAA CCCAGAAATG GCATCGCCAC AGAGTACCAA AACCGGCTTG AATCTACCCG CACGGATGAA CCAGACTTCG TTGCGTCTGG AGACGTTTTC GAGCTCATTT CGTGGTATTT CGAGTTTATC CTCGCCGTCT AAATCTACTT GCAGCGACAG ATTCATACCG TGCAGATCTT CTTCGAGACT CCACGCTTTC GATCTGCAGG ATAAGGAACC GACCACGCCG GTTAAAGAGG GAGGGAACGA AGCCTACTCC AGACTTTTGA AATCTGAGCT TTTTGGATCT GATTTCGCTT CTCCTTGTTT GTCTCCTGCA GGTGGTCAAG GATCTGCTTC TTCTCCGATG AGTCCATGTA CTAACATGTT GAGATTCAAG ACGGATCGTT CCAATTCAAG TCCTAGTTCG CCGTTTTCTC CTTCCATTCT CGGAAATGAT AATGGTCTCT CCAGTGACTC GTCTCCGCCT CCGAAACCGC CTCGCAAGGT TCCTAAAACA CCTCATAAGG TCTTGGACGC TCCTTCCTTA CAAGATGACT TCTACTTGAA TGTTGTGGAC TGGAGCTCAC AGAATGTTCT TGCGGTTGGG CTTGGTACTT GTGTCTATCT TTGGACTGCT TCTAATAGCA AAGTGAGTAA GTTATGCGAC CTAGGGCCTA ATGACAGCGT GTGCTCGGTT CAGTGGACAC GGGAAGGTTC ATATATATCT ATTGGTACAA GTCATGGTCA GGTTCAGGTT TGGGACGGAA CACAGTGCAA GAGAGTCCGA ACCATGGGAG GTCATCAGAC GAGAACTGGT GTCTTGGCAT GGAACTCAAG AATCTTATCA TCAGGGAGCA GAGACAGAAA CATCCTTCAA CATGATATCC GAGTCCAGAG CGATTATGTC AGCAAACTCG TGGGGCACAA ATCTGAAGTC TGCGGTCTGA AATGGTCTCA CGATGATAGA GAGCTTGCGT CTGGAGGCAA TGATAATCAG TTATTGGTAT GGAACAATCA TTCACAGCAA CCTATTCTGA AGCTGACTGA GCATACAGCA GCGGTTAAGG CAATTACATG GTCTCCTCAT CAGAGCAGCC TCCTTGCTTC AGGAGGTGGA ACCGCAGACA GATGCATTAG ATTCTGGAAC ACGACAAACG GACATCAGTT AAACAGCATC GACACTGGGA GCCAGGTCTG CAATCTGGCA TGGAGCAAGA ATGTTAACGA GATAGTGAGT ACTCATGGCT ACTCTCAAAA CCAAATCATG CTCTGGAAGT ACCCATCCAT GTCAAAGGTT GCAACACTTA CTGGCCACAG TATGAGAGTA CTTTACTTGG CTACGTCACC TGATGGCCAG ACTATAGTGA CCGGAGCAGG AGATGAGACC CTGCGGTTTT GGAACGTCTT CCCTTCAGTG AAAATGCAGA CACCAGTGAA GGACACAGGT CTATGGTCAT TGGGGAGGAC ACAGATCCGA TAACCTGCAT TCTATTTATT CAATTTGTTC TTTTCCTTTG TAAACTACAT AATCCCAGAA AATAGTGAAT ACATCAATTA AAA 
Length1753
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5394007.. 5396617
Download Sequence
A.thaliana
AGI-codeAT5G13840.1
DescriptionFIZZY-related 3
TAIR curator summary
Alias[CCS52B][FZR3][cell cycle switch protein 52 B][FIZZY-related 3]
Gene coexpression
MR
MR Locus Description
3 Ahg920104
5.65685 Ahg323761 gamma response gene 1
6.9282 Ahg481399 TPX2 (targeting protein for Xklp2) protein family
8.3666 Ahg483715 signal recognition particle receptor protein, chloroplast (FTSY)
11.6619 Ahg943724 Pentatricopeptide repeat (PPR-like) superfamily protein
14.8324 Ahg479849 casein kinase I-like 10
26.0768 Ahg485723
27.8747 Ahg477110 aldehyde dehydrogenase 5F1
31.305 Ahg911649
31.749 Ahg484766 chromatin remodeling 38
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression