Detail



ID : Ahg324777

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324777|fgenesh1_pm.C_scaffold_5002321
Sequence
ATGAATGGAG ATAGACCAGT GGAAGATGCT CATTACACGG AGACGGGTTT CCCTTATGCT GCAACTGGCA GTTACATCGA TTTCTATGGT GGTCCGGCTC AGGGGCCTCT AAACTATGCT CATGCCGGAA CTATGCATCC TCAGGACAAT CTGTACTGGA CCATGAATTC AAATGCATAC AAGTTTGGGT TTTCAGGATC AGATAATGCT TCTTTCTATG GTTCTTATGA CATGAACGAT CATTTATCGA GGATGTCCAT AGGGAGAACA AATTGGGACT ACCATCCCAT GGTGAACGTT GTTGATGATC CTGAAATCAC AGTTACACGT TCTGTCCAAA TCGGGGACAC AGATGAGCAC TCTGACGCTG AAGAATGCAT TGCAAATGAG CATGATCCCG ACAGTCCTCA GGTATCCTGG CAAGATGATA TTGATCCTGA TACAATGACC TATGAGGAAT TAGTAGAGCT GGGGGAAGCA GTAGGAACAG AAAGCCGGGG GTTGTCTCAG GAACTCATAG AAACGCTTCC CACTAGAAAG TATAAGTTTG GGAGCATCTT CTCCAGGAAA AGAGCTGGGG AAAGGTGTGT GATATGCCAG CTCAAGTACA AGATAGGGGA GAGGCAAATG AATCTGCCGT GCAAGCATGT GTATCATTCT GAATGCATTT CCAAATGGCT AAGCATCAAC AAGGTTTGCC CAGTGTGCAA CAGCGAGGTC TTTGGAGAGC CCAGCATCCA TTGA 
Length744
Protein Sequence
Protein Residue
Map Locationscaffold_5: 20059702.. 20061069
Download Sequence
A.thaliana
AGI-codeAT3G63530.1
DescriptionRING/U-box superfamily protein
TAIR curator summaryEncodes a novel E3 ubiquitin ligase that acts as a central negative regulator of Arabidopsis floral organ size. Organ size is limited by restricting the period of proliferative growth, rather than the rate of growth and appears to act in a novel pathway, independent of ANT and JAG. Both mRNA and protein are expressed in all actively growing regions of the plant and the vasculature and the protein is rapidly turned over by proteasome-mediated degradation.
Alias[BB][BB2][BIG BROTHER]
Gene coexpression
MR
MR Locus Description
37.054 Ahg927211 Glycosyl hydrolase family protein
44.0681 Ahg920848 response regulator 7
63.2139 Ahg923423 Family of unknown function (DUF566)
70.4202 Ahg473597 2-oxoacid dehydrogenases acyltransferase family protein
73.4098 Ahg473885 Protein phosphatase 2C family protein
89.0393 Ahg933364 expansin A6
94.8156 Ahg479268 receptor-like kinase 902
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression