Detail



ID : Ahg935404

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935404|scaffold_403392.1
Sequence
GGAGGAAGAA GAAGATCTGC TTCTGCAAAA AACCTTATCC TGCTATGGCC TCCACTTTCG TCTCTCTACC CAATCCTTTC TTTGCCTTTC CGGTCAAAAC CACTACTCCT TCTACAGCTA ACCATAAGCT TCTCGGAAGT CGAAGAGGTT GTCTTAGAAT CAAAGCGATT TCCACTAAAT GGGAACCGAC AAAGGTTGTT CCTCAGGGAG ACAGAGTTCT TGTTCGTCTT GAAGATCTTC CTATGAAATC GTCGGGTGGA GTATTGTTGC CTAAAGCAGC TGTGAAGTTT GAGAGGTACT TAACAGGAGA GGTTATCTCT GTTGGTTCTG AGGTTGGACA ACAAGTTGGT CCTGGAAAGA AGGTTCTCTT CTCTGACGTG AGCGCTTATG AGGTCGATTT GGGAACCGAT GCTAGACATT GCTTCTGCAA AGAGAGTGAC TTGTTGGCCC TCGTTGAGTG AAGTCTTGTC CAAGAGAAAG A 
Length481
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20642767.. 20643829
Download Sequence
A.thaliana
AGI-codeAT2G44650.1
Descriptionchloroplast chaperonin 10
TAIR curator summaryEncodes a chloroplast-localized chaperonin 10 whose mRNA is expressed in leaves and stems but not roots.
Alias[CHL-CPN10][CPN10][chloroplast chaperonin 10][CHLOROPLAST CHAPERONIN 10]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg496546 glutamate-1-semialdehyde-2,1-aminomutase
12.3693 Ahg492365 31-kDa RNA binding protein
13.4164 Ahg470515
16.4924 Ahg945589 acyl carrier protein 4
18.0555 Ahg482332 Ribosomal protein S5 family protein
18.1659 Ahg488978 chaperonin 20
19.6723 Ahg946346 P-loop containing nucleoside triphosphate hydrolases superfamily protein
20.1246 Ahg470932 Chloroplast J-like domain 1
21.9773 Ahg484888 ribosomal protein L9
21.9773 Ahg478688 Ribosomal protein S10p/S20e family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression