Detail



ID : Ahg325615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325615|fgenesh1_pm.C_scaffold_6000835
Sequence
ATGAGCATAA ATAGGAATTT GTTGAATATC ATAGTTGTCC TTTGTGTATG TCTCAATTTG GGTTGTAACG AGGGAGCTCA AGAAAGAGAG ATTGATGATT CTCATACAAT CCAAGTCAGC TCTCTCTTCC CACCATCATC ATCATCTTGT GTTCTTTCTC CCAGAGCGTC TACTACAAAG TCCTCACTGC ACGTGACGCA TAGGCACGGC ACGTGCTCGC GTCTAAACAA TGGCAAAGCC ACGAGTCCAG ACCATGTCGA GATCCTAAGA CTCGACCAGG CTCGCGTAAA CTCCATCCAC TCAAAACTGT CGAAGAAACT CACAACAAAT CACGTCAGTC AAAGCCAGTC AACGGATCTA CCGGCTAAAG ACGGAAGCAC ACTCGGTTCA GGTAACTACA TCGTGACGGT CGGACTCGGG ACACCAAAGA ACGATCTATC ACTAATCTTC GACACCGGAA GCGATTTAAC GTGGACTCAA TGTCAGCCAT GTGTTCGAAC TTGCTATGAC CAAAAGGAAC CAATCTTTAA CCCTTCTAAG TCTACTTCTT ACTACAACGT CTCCTGTTCA TCATCAGCGT GTGGTTCCCT CTCTTCAGCT ACAGGAAACG CCGGAAGTTG TTCGGCTTCG AATTGCATCT ACGGTATTCA ATACGGCGAT CAATCATTCT CCATCGGGTT TCTCGCCAAG GATAAATTTA CACTAACGAG CTCCGACGTA TTTGACGGTG TTTATTTCGG TTGTGGTGAG AACAACCAAG GACTTTTCAC CGGTGTCGCC GGACTTCTCG GTCTCGGCCG TGACAAGCTT TCATTTCCGT CGCAGACGGC TACGGCTTAC AATAAAATCT TCTCTTACTG TCTCCCTTCA TCCGCAAGCT ATACCGGACA TCTCACCTTC GGATCCGCCG GAATCTCCAG ATCCGTCAAA TTCACGCCGA TTTCAACCAT CACTGATGGA ACCTCGTTCT ACGGCCTTAA TATCGTTGCA ATCACCGTCG GCGGTCAAAA ACTGCCGATT CCTTCAACCG TGTTCTCAAC TCCGGGAGCT TTAATCGATT CAGGAACCGT TATCACTCGT CTCCCGCCGA AAGCTTACGC GGCGTTACGA AGCTCGTTCA AGGCGAAGAT GTCAAAGTAT CCGACCACGT CAGGCGTCTC GATCTTGGAC ACGTGTTTCG ATCTCAGCGG ATTTAAGACG GTGACGATCC CGAAAGTGGC GTTCTCTTTC AGCGGTGGCG CCGTCGTGGA ACTTGGCTCA AAAGGAATAT TTTACGCGTT TAAGATATCA CAGGTTTGTT TGGCGTTTGC AGGGAATAGC GATGACAGTA ACGCTGCCAT CTTTGGAAAC GTTCAGCAGC AAACGCTAGA AGTTGTGTAC GATGGTGCGG GTGGGCGGGT CGGGTTTGCT CCAAATGGGT GTAGTTAA 
Length1428
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4143610.. 4145546
Download Sequence
A.thaliana
AGI-codeAT5G10770.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.63325 Ahg484750 Methylenetetrahydrofolate reductase family protein
9.8995 Ahg351269 alpha/beta-Hydrolases superfamily protein
11.6189 Ahg484593 nodulin MtN21 /EamA-like transporter family protein
23.6854 Ahg330308 Calcium-dependent lipid-binding (CaLB domain) family protein
23.8747 Ahg478817 Subtilase family protein
24.1661 Ahg472449 Protein of unknown function (DUF581)
26.4953 Ahg494419 subtilase family protein
28.4605 Ahg315184 cyclic nucleotide-gated channel 12
29.2404 Ahg487228 cyclin-dependent protein kinase inhibitors
29.2916 Ahg494245 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression