Detail



ID : Ahg326738

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|326738|fgenesh1_pm.C_scaffold_6001958
Sequence
ATGGGAATCA TTGAAAACGG AACAATATCG GGTAACTTGC CGAGCAAGGA GGCGTTTGTG GTTCACTATC CTGGCTACCC ATCATCTATT TCCCGAGCTT TGGAGACTCT TGGGGGAATC CAAGGGATCA CAACCGCAAG AGAATTAATG TCAAACAAGC TTGAGCTTCA TTTCCGCCCT GAAGACCCTT ATGCACATCC TGTCTTGGGA GAACAACGTC CTTGTCATGG TTTTCTGTTA AAAATTTCGA AGGAGGTCGT TAAGAAAGAT TCTCTGCCTG AAAGTCAACC TGTTCTTGCC ACTAGCAATG CATGCTTACC AGAAGATTTC CCAGCCCTGT GTGCTGATAT TGTAGCTCGT GTGTCTGAAT CGTATTGTTT TGATGGCATG GCCGACTACC AGCATGTAGT TCCTATTCAC GCTGATATTG CACAGCAGAA GAAGAGAAAA TGGATGGAGG TGAAGTCACT TGCAGGAAAA AACGATCTAA TGAACATGGC TGATGAAGAT GTAATGATGT TATTGCCACA GTTCTTTTCA CCCAAAGATA TGCCAGACAA CTTGGTGCTG AGACTTCCAG TAACATCAAG CCCAAAAAAG AAAGATGAGG AACTAACTCA GAATCTTTAT GAGATAGATA TTGGCCCAGT ATTTGCAATT GATTTCAGTA TCCCGAAGAT ATTAAAATGG GAAGACTTTA TTGTTCCCAG CTCCAACCAA TGGAAATGGC AGGTAGCAGT GTCTGCATTG TTTGAAGAGC GACCTGTGTG GACAAGAGAT TCCATAGTCC AACGACTACT TGATAAAGGT CTTAAATGCA CACATCATAT GCTAAACAGG TTTCTTCTTA GGGCTGCATA TTATTTTTCG GGTGGTCCAT TTCTTAGGTT CTGGATTAAA AGAGGCTATG ATCCACGGAA AGATCCTGAA TCTCGCGTAT TCCAGAGAAT GGAATTCAGG GTTCCACCTG AATTAAAGGG TTATTGTGAT TCCAATGCAA CTAACAAGTC AAAGCCAAGC TGGGATGACA TTTGTGCGTT TAAAGTATTT CCTTTCAAGT GCCAAACATT TCTACAGTTA TTCGAACTTG ACGATGAGTA CATTCAACAA GAGATAAGAA AGCCTCCCAA GCAGACTACT TGTAATTATA AAACAGGATG GTTTTCTGAA GCGCTGCTTG ACAATTTGAG ACTTCGTGTA GCTGTGAGGT ATGTATCTGT GTTTCCGGAG CCAGGTTTTG AAGACGTTTT TAAATCTATT CAAGAAGAGT TTGAGAGGTC AGAAAAGACA CGAATTCAGA AAGATGCACT GAAACCATAT CAACGGAATC ACCAGGAAAC ATCTAAAGAT ATGAAGAAGT GTAAAAACAC AAACAAAGAG AAAGATAGTG ATGTTAATGC GGATGACGAT ACTGAAGACG TAGATGATGA AGACGAGGAA CTCAATGTGG CTGCAAATGA TGATGAGATA TCGATTAGTT CTCACGAATA TGGTGACATG GAGAACAACT CCAGAACCTA TCTACAAGGT TTGTTCAATA GTTTTCCAAG CAGCGCACCA GCTTTGTATG GTAATGCCAA TGATGGTAGC GATGGAGAGT ATCCGATTTA CGAGCAAGAA TCCAACGATG ACAAAGACGA CAATGACGAA GACGACGATG ATGAGTGA 
Length1668
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10094070.. 10098675
Download Sequence
A.thaliana
AGI-codeAT5G24450.1
DescriptionTranscription factor IIIC, subunit 5
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.1987 Ahg494576 Homeodomain-like transcriptional regulator
22.0907 Ahg496814 Serine carboxypeptidase S28 family protein
24.1868 Ahg939245 SET domain protein 14
28.3549 Ahg950137 Pollen Ole e 1 allergen and extensin family protein
29.1548 Ahg327694 transducin family protein / WD-40 repeat family protein
29.7321 Ahg496276 conserved peptide upstream open reading frame 15
30.05 Ahg934176
33.4664 Ahg483599 casein kinase II beta subunit 4
33.9411 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
34.4093 Ahg316186 Sec14p-like phosphatidylinositol transfer family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression