Detail



ID : Ahg327088

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327088|fgenesh1_pm.C_scaffold_6002308
Sequence
ATGCCGCGAA GCAGAGACGA AGACGATGAA ATAGACGGAG ACTACGAAGG ATTGGAATTA GAGGAAGAAG AGGAAGAAGA CGAAGAAGAA GAAGAGAGAG GAAGAGGCGG CGGCGGTTCT AGGCGGAAGA GAGGAAGATC GAATTTTATT GATGATTATG CGGATGAAGA TTCTCAGGAA GAAGACGATG ATGATGAAGA TTATGGTAGC CGTGGAGGTA AAGGAGCTGC TAGTAAGAGA AAGAAGCCTT CTGCTTCCAT TTTCTTAGAC CGAGAAGCTC ATCAGGTTGA TGATGAGGAG GAAGAGGACG AAGAAGAAGG AGAAGATGAC TTTATTGTGG ATGCTGGAAC GGACCTTCCT GATGAGCGTG GTGATAGACG GTACGAACGG AGGTTTCTTT CTCGTGACGA AAATGATGAG GATGTGGAAG ATCTTGAGAG AAGAATTCAA GAGCGGTTCT CTAGGCATCA TGAAGAATAT GATGAAGAAG CCACTGATGT TGAGCAACAA GCGCTTTTGC CATCAGTTCG CGACCCGAAA TTGTGGATGG TGAAATGTGC GATTGGTCGC GAAAGGGAGG TTGCTGTTTG TCTTATGCAA AAATTTATAG ATCGAGGAGC TGATTTGCAG ATTAGATCTG TTGTTGCCCT TGACCATCTT AAGAATTATA TATATGTTGA AGCAGACAAG GAAGCTCATG TGAAAGAGGC AATCAAGGGC ATGAGGAATA TATATGCTAA TCAGAAGATC TTACTTGTCC CGATAAGAGA AATGACAGAT GTGCTTTCTG TTGAAAGCAA AGCAATTGAT CTATCTCGGG ATACCTGGGT TAGAATGAAA ATCGGGACGT ATAAAGGTGA TCTTGCAAAG GTAGTTGACG TTGATAATGT GCGTCAGAGG GTCACAGTCA AGTTAATCCC AAGAATTGAT CTGCAGGCAC TAGCCAGTAA GCTGGACGGA AGAGAAGTTT CAAAGAAAAA AGCCTTTGTT CCACCTCCAC GTTTCATGAA CATTGATGAA GCAAGGGAAT TGCACATACG TGTTGAGCGT CGGCGTGATC CCATGACGGG TGATTACTTT GAAAATATTG GTGGCATGCT TTTCAAAGAT GGTTTTATGT ACAAAACAGT ATCATTGAAG TCCATCACTG TTCAGAATGT TACACCAACT TTTGACGAAC TTGAAAAATT CAATAAACCA AGTGAAAATG GAGAGGGCGA TTTTGGTGGT CTGTCAACTT TATTTGCAAA CAGAAAGAAA GGGCATTTCA TGAAGGGTGA TGCAGTTATT GTTATAAAGG GGGATCTGAA AAACTTGAAG GGTTGGGTTG AGAAAGTAGA TGAAGAAAAT GTCCTTATCA GATCAGAAAT GAAAGGTCTC CCTGATCCTC TTGCTGTAAA TGAGAGAGAG CTTTGCAAGT ACTTTGAACC TGGAAATCAT GTGAAGGTTG TTTCTGGGAC CCATGAAGGA GCAACAGGCA TGGTTGTCAA AGTTGATCAA CACGTTCGAG TGTTTGCTGA TCATGTTGTT GAGAGCTCAG AAGTGACAAC TGGTGTTACC AAAATTGGGG ACTATGAACT TCATGATCTT GTGCTTCTGG ATAACCTGAG CTTTGGAGTA ATTATACGAC TAGAGAATGA AGCTTTTCAG GTTCTTAAAG GGGTTCCTGA CAGACCAGAG GTTGCTCTTG TCAAACTCAG AGAAATCAAA TGCAAAATTG AGAAGAAAAT CAATGTTCAA GATCGCTACA AAAATGTCAT TGCTGTGAAA GATGACGTCA GAGTCATCGA GGGTCCTAGC AAAGGTAAAC AAGGTCCGGT GAAGCATATC TACAAAGGAG TCTTATTTAT ATATGATCGG CATCACCTTG AGCATGCTGG ATTTATCTGC GCTAAATGCA CATCATGCAT TGTTGTTGGT GGATCACGTT CTGGCGCTAA TAGAAATGGT GGTGATTCTT TTTCAAGGTA TGGCAATTTC AAGGCACCTG CCCCAGTACC CTCATCCCCA GGAAGATTTC AACGTGGCAG AGGCGGAGGA TATAATAACT CTGGAGGGAG GCATGGGGGC GGAAGAGGAC GGGGAGACGA TTCTTTGTTG GGTACTACTG TTAAGATCCG TCTAGGACCT TTCAAGGGGT ATAGGGGACC TGTAGTAGAA GTGAAAGGAA ATTCAGTGCG TGTAGAACTT GAGATGAAGA TTGTGACAGG CAAGCTCTTG AATTCGCTTT TCCGCATGTG GGTTTCTACA TGTCGAAGGA ATTTTAACAA TAGTTTGTAT ATGCAGTTGA TCGGGATGCA ATATCAGATA ATGTTGCGAC AACACCCTTT AGATACATCT CGGTATAGTA TGGGAAGCGA AACACCTATG CATCCTTCTC GGACTCCACT TCATCCTTAT ATGACTCCAA TGCGGGACTC TGGAGCTACA CCAATCCATG ATGGAATGAG GACACCCATG CGAGATAGAG CGTGGAATCC TTACACGCCT ATGAGTCCAC CAAGGGATAA CTGGGAAGAT GGAAATCCGG GATCTTGGGG AACGAGTCCT CAATATCAGC CGGGAAGTCC TCCTTCACGG GCATATGAAG CACCAACTCC TGGCTCAGGA TGGGCTAGTA CTCCTGGTGG TAGTTACTCG GATGCGGGGA CGCCTAGAGA CCATGGTTCA GCTTATGCTA ATGCCCCAAG TCCTTACCTG CCATCGACAC CTGGGCAACC CATGACACCA AGCTCGGCTT CATACTTACC TGGAACTCCT GGAGGACAAC CAATGACTCC TGGAACTGGC CTCGATGTCA TGTCTCCTGT TATAGGTGGG GATGCTGAAG CATGGTTCAT GCCCGATATT TTGGTTGACG TACACAAGGC TGGAGAAGAC AGCGATGTGG GCGTCATCCG AGATGTTTCG GATGGAACGT GTAAAGTGTC TCTCGGGTCC AGCGGTGAAG GTGACACTAT AATGGCCCTC CCAAGCGAAC TGGAGATAAT TCCTCCGAGG AAATCTGATC GTGTCAAAAT AGTTGGTGGC CAATATCGTG GGTCTACAGG TAAGCTGATC GGAATCGACG GGTCTGACGG AATCGTTAAG ATAGATGATA ATCTTGACGT CAAGATTCTG GACCTGGCCT TATTAGCCAA GTTTGTGCAA CCTTGA 
Length3156
Protein Sequence
Protein Residue
Map Locationscaffold_6: 17428186.. 17433956
Download Sequence
A.thaliana
AGI-codeAT4G08350.1
Descriptionglobal transcription factor group A2
TAIR curator summary
Alias[GTA02][GTA2][global transcription factor group A2]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg476840 eukaryotic translation initiation factor 2 (eIF-2) family protein
3.31662 Ahg481487 CTC-interacting domain 7
4.58258 Ahg933960 P-loop containing nucleoside triphosphate hydrolases superfamily protein
7.93725 Ahg471078 cell division cycle 5
9.38083 Ahg478733 evolutionarily conserved C-terminal region 2
11.3137 Ahg492144 DEK domain-containing chromatin associated protein
11.6189 Ahg933732 Thioredoxin superfamily protein
11.6189 Ahg323737 high mobility group B1
12.083 Ahg490644 methylthioadenosine nucleosidase 1
12.3693 Ahg496456 SPFH/Band 7/PHB domain-containing membrane-associated protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression