Detail



ID : Ahg327303

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327303|fgenesh1_pm.C_scaffold_6002523
Sequence
ATGAATTCTA TGTTGCAGCG TTACCGGAAC GATCGCCGCA AGCTCATGGA GTTTCTTATG TCTTCGGGTT TGGTAAAGGA GCTTCGTTCC CCTTCTGGTT CTTCTACTTC TCTCTCTCCC GCTGATTTGG ATGCTCTCAG CGCCGATTAT GTTTTGGATT GCGTGAAATC CGGTGGTGTA GTTGATGTAT CCAAGGGCAT AGAGAAATAC AATTTTGAGT CATCATACCC TGTAACTATA CACTCTGAGT CTAGAGATTC CTTTTTTCTT GTATCGAGTC CAGATATAGC AGGTTCTCCT CCTCATCGTA TGCCTCCTCC TCCAGTTAAC ATGGAAAAAT CCAGTAACAA TGACCCAGAC ATGTCATGCC ACATAGATTC TTCTAGTACT CCTTCATCCA GAGACAACTA TGTATTTAAA GAGGAAACAC CTGACATCAA ACCCGTGAAA CCTATCAAAA TCATTCCTCT TGGCTTGCCA CCCTTGAGAA CAGGGTTATC GGATGATGAT TTACGAGAAG CAGCATATGA ATTACTGATT GCTTCTATGT TGCTTTCAAG TTTCTTACGG GTTTTTACAA ACAGTGTTGA GGCGTATCCT ACTCAGAGAA GAAAAATAGA AAAAAGCTCA AGACTAATGT TAAGTTTGAA AAGAAAAGAT AAACCACATC TACAGCCTCA GATCTCTAAT ACACACTCAG AGATTTCATC AAAGATGGAT ACATGCATAC GGAGAAATCT GGTACAGTTG GCTACATTAA GGACAGGTGA ACAAATTGAT CTTCCACAGT TAGCATTGGG GCTTTTGGTT GGAATATTCA AATCAGATTT TCCTAATGAA AAACTCTACA TGAAGTGGAA GACTAGACAG GCTAACCTAC TTGAAGAAGT CCTCTGTTTC TCACCTAGTC TGGAGAAAAA TGAACGAGCA ACTATGAGAA AATGCCTTGC AACGATTAGA GACTCAAAGG AATGGGATGT TGTAGTGTCT GCTTCGCTAC GGATTGAGGT TCTATCGTCT ATAAAGCAGG TGGCTTCAAA GTTGTCATCA CTACCAGGCC GTTGTGGTAT TGAAGAAGAA ACTTATTACT GGACTGCTAT CTACCATTTG AACATTAGAC TCTATGAGAA ATTATTATTT GGTGTATTTG ATACTCTTGA TGAGGGGAGC GCAATTCAGG AGTTGCAGAA AGTTACTTCC GCTGAAAGTG GCAACTCAAA GGAAGATCTT TATTTAAGTC ATCTAGTATG TTCAAGGCAA ACCATTGGAA CTGACATACA CTTAGGTCTC GTGAAGTCTA TTTTCACTTC AGTTAGTGCT TGGTGTGATG ATAAACTTCA GGACTACCAT CTACACTTTG GTAAGAAACC TCGTGATTTT GGAATGCTTG TCAAATTGGC ATCAACAATT GGACTTCCTC CAGCTGACAG TACCAGAACT GAGCTTATCA AGCTGGATAC CTTGGGTGAT GATGTTAGTG ATAAGATACA ATCCTATGTT CAGAACTCTA TCAAAGGTGC ATGTGCCAGG GCTGCACATT TTGCTTACGT GAAATCTCAT GGTGAGCGTA CGCATGCTCT AGCTCTGCTT GCAAATGAAC TGAGCGTCAT CGCAAAAGCA GAAATCAATG AGTTTGTCCC AGTATTCTCC AAATGGTTAC CCGAATGTAT GATGATCTCG GCCATGCTGC TACATCGGTT TTATGGAGAA AGACTGGAGT GGGAGCCTCT ATCAGTTCAG CAAAGACATG CTGCATCAAT CGTTGAAATA TTCAGGATCA TAGAAGAGAC TGTGTCTCAG TTATTTGGTT TGCATCTACC TGTTGATATC ACACATCTCC AAGCTCTTCT CTCATTAATT TACCATAGCT TGGATACTTA TCTTCAGAGA GTTTTCGATC AACTAGTTGA CAAGAAGTTT CTGTATCCGT CAGCTCCTCC TTTAACTCGA TTCACAGAAA ATGTAATGCC AGTAATGAAG AGGAAGTCGC TCGAGTTTAG TGAGCCAGAT AATAAAATAG TTAAGAAATT GGATGAACTG ACAATACCGA AACTCTGCAT AATATTGAAT ACACTCTGTT ATATCCAGAA ACAAATCAGT GCAACAGAAG TAGGCATAAG GAAATCTTTG ACACTTGTTG AAGCCTCTCT CAACAAGAGA TCTGAAATCG AGACTGATGA ATCTGAAGTG GAGAATTCTT TGACGCATAG TGAAGCTGTT GATGAGCTCT TTGCTACCAC CTATGACAGC CTCAGGGACA CCAATGCCAA TTGCATAACC AAAACCCGTG ACCTAATTGC ATTAACTTAC ACTAAGAAAT GCAATGCACA GGTCCTTGAT ACTGTATGCA GTTTGAGTTA TGAGGACTCA CGGGATATGG TGGTTTTAAG CATCTGCCGA TCCACTCTGG AAGCTTATGT TCGAGTGCTA CTTGATGGAG GGCCAACCCG TGCATTTTCG GATTCAGACA TCACCTTGAT GGAAGAGGAT CTCGGTATTT TGAAAGAATT CTTCATTGCC GATGGAGAGG GTCTTCCTCG TTCACTAGTT GAGCAAGAAG CAAAACAGGC GAAAGAGATC CTTGACTTGT TCTCTCTCGA GAGCGATATG CTTATTCAGA TGCTAATGAC TGCGAGCGAG CTCATCAACA TGGGAGTGAG TTCAGAGCAG CGGCGCTTGG AGGATGCACA AACTCTTGTT AGAGTTCTTT GCCACAAGAA AGACCGTAAC GCCTCCAAGT TCTTAAAGCG CCAGTACGAG CTTCCTATGT CATCAGAGTA TGAAGATGTA ACATCGAATC TGCCTGCTTT ATCCGAAATC GTGAGAAGCA CATCCACCCA CTGGAGCACA ACAAGCCAGA ATAGTTTCAG TTCCATCAAG AAGAAGATTC AGGAGGCAAC ATCTGAAATC AGGAACAACT CAGGATGGTA G 
Length2931
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20161141.. 20169882
Download Sequence
A.thaliana
AGI-codeAT4G11670.1
DescriptionProtein of unknown function (DUF810)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg479493 Vacuolar sorting protein 9 (VPS9) domain
11.8743 Ahg492999 Pollen Ole e 1 allergen and extensin family protein
21.9089 Ahg485083 FTSH protease 7
24.3311 Ahg479552 EPS15 homology domain 1
27.4591 Ahg922568 Protein of unknown function (DUF616)
29.5466 Ahg490342 sucrose synthase 3
29.8496 Ahg903623
31.4166 Ahg495045 chloride channel C
36.5377 Ahg931502
37.0405 Ahg477359 Protein of unknown function (DUF1421)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression