| Annotation |
|---|
| Description | jgi|Araly1|479493|fgenesh2_kg.3__2194__AT3G19770.1 |
| Sequence |
AATAAACGAC CGTCGTTTTT GCTGTTGGTA GTCAGCGAGA CGAAACTCAT TCTCACTGGT CAATAGACGG AGATAAACGG GTCATCGGCG ATGGAGAACA CGGACGTCTT CTTGGGGCTG CATGATTTCC TGGAACGGAT GCGCAAACCC TCCGCCGGCG ATTTCGTCAA ATCCATTAAA AGTTTCATTG TTTCATTCTC GAACAATGCA CCAGACCCGG AAAAAGATTG TGCTACTGTT CAGGAGTTCT TTTCTAAGAT GGAGGCTGCT TTCAGGGCTC ATCCACTTTG GTCTGGTTGT TCTGAGGAGG AATTGGACAG TGCGGGAGAT GGCCTAGAGA AGTATGTTAT GACAAAGCTA TTTACCCGGG TATTTGCTTC AAACACTGAG GAGGTTATAG CTGATGAGAA ACTCTTTCAG AAGATGTCAC TGGTTCAACA ATTCATTTCT CCTGAGAATT TGGATATACA ACCAACTTTT CAAAATGAAT CATCATGGCT GCTAGCTCAA AAAGAGCTCC AGAAGATAAA CATGTACAAA GCTCCTCGTG ATAAGCTTGT GTGTATCCTT AACTGTTGCA AAGTGATAAA TAACTTACTG CTAAATGCTT CAATTGCTTC AAACGAGAAT GCACCTGGAG CAGACGAATT TCTTCCTGTT TTGATATATG TTACAATAAA GGCTAACCCT CCACAACTTC ACTCAAACTT GTTGTATATA CAAAGATATA GGCGTGAGTC TAAACTTGTT GGTGAAGCTG CGTACTTCTT CACAAACATA CTCTCTGCAG AGTCTTTCAT CTCTAATATT GATGCAAAAT CTCTTTCATT GGATGAAGCT GAGTTTGAAA AGAACATGGA ATCTGCACGA GCACGAATTT CTGGTTTGGG CAGCCAGTCT TATCAAACTG GTCATGGCTC TGCATCACCC CCTCGCGATG AGTCCACTCT TCAGAAAACT CAAAGTCTGA ATCCCAAGAG GGAAAACACT CTTTTCCAAT CAAAATCGTC TGATAGTCTT TCTGGGACCA ACGAAATACT GAATATAAAC AGTGAAACAC CAATGAAGAA AGCTGAATCC ATTTCAGATT TGGAAAATAA GGGTGCAACG CTTCTGAAGG ATACCGAGCC AAGCAAAGTC TTTCAAGAAT ATCCTTACTT ATTTGCCAGT GCTGGTGATC TGAGGATAGG AGATGTTGAG GGCTTGTTAA ATAATTATAA ACAGCTCGTT TTCAAATATG TGTGCCTGAC CAAAGGATTG GGTGATGCAA CATCTTTAGC TCCATCCAGT TCACCCTTGC AAGCGTTGTC CGGTTTTGAT ACGTCTAAGG AATCTGAGGA TCATACAACA TCGTCTTCAG ATGTGCAAAT GACAAGGGAA ACTGACAGCA GTGTTGATGA TTTGATCCGA GCTCTACAAG GTGAAGGGGA AGATGTTAAT AATTTGTCAG ATGTAAAACA TGAAGAATAT GGCGCAATGT TGGTAGAGCG AAAGGATGAA GAACGTGATC CCAAGGTGCT AGGAGAAGCA GATGCCAAAG ATACTGATTT GATTAAGCAA ATTCCTAAGA GAGAAAGTGA CAATTCTAGT TCCCGACCTG CAGAAGATGA AGATGTTGGT TCCAAACACC CAGTTGCGGA AGCTTTTGAG TGAGCAGAAT GACTCGTCAA GGTGATGAGA GTCTCTTGAA TGGGATCAGT TATTTGTTGA GGGGGGGAAG CAGAGGTCAG AGCATAGGTA AAATGTCATC CATTCGTTTC CTGCAGCTGT GTGTTTTGAG GATGACTGGA GAGTTGTATG AGGTGAAGGC TATCTGTATC TTTAGTCTCT TGGGAAACAG GAGCAGTCAA ATGGTAACTC TACTTTCTTT AGTTGTGTTT TTCTTTTTTT TTGCAGTCCA CTCTTTGTTT CTCTATGATA TGATTTTGGA GGGGCTCCTC AACATTTATC AATCCATATG TAACTCTTAC ATCTGCTATT GCGTATATAC TATAAGGATA TATTCAGAAT AATATTTGCC AAG |
| Length | 2023 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 8070616.. 8072768 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G19770.1 |
| Description | Vacuolar sorting protein 9 (VPS9) domain |
| TAIR curator summary | Guanine nucleotide exchange factor VPS9a. Can ctivate all Rab5 members to GTP-bound forms in vitro. Required for embryogenesis. Regulates the localization of ARA7 and ARA6. Involved in postembryonic root development. |
| Alias | [ATVPS9A][VPS9][VPS9A][ARABIDOPSIS THALIANA VACUOLAR PROTEIN SORTING 9A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg327303 | Protein of unknown function (DUF810) |
| 14.4914 |
Ahg936652 | Protein kinase superfamily protein |
| 24.5357 |
Ahg473066 | syntaxin of plants 61 |
| 25.0998 |
Ahg478603 | nuclear factor Y, subunit C11 |
| 27.6225 |
Ahg494576 | Homeodomain-like transcriptional regulator |
| 34.9714 |
Ahg919779 | branched-chain amino acid transaminase 2 |
| 36.0832 |
Ahg933310 | vacuolar proton ATPase A1 |
| 36.4692 |
Ahg487067 | ubiquitin-protein ligase 4 |
| 37.7889 |
Ahg896178 | glutathione S-transferase zeta 1 |
| 38.7298 |
Ahg481669 | SIT4 phosphatase-associated family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|