Detail



ID : Ahg327454

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327454|fgenesh1_pm.C_scaffold_6002674
Sequence
ATGTCTATTG CACTTCCAAC TGGAATTGAT GGGTCGAGCC GATCTATGAT TAAGGTGCAG AGTATAAGTT TCACTGAGAA GTCATGGAGT CCTCTGCTGA GACTAGATTC AAAATCTAGA AGCTTAAGTG TGAATAAACG GTCGACAATA TGTATGTCAC TTCAGCAAGC AAGCAGATCC AAAGTAGCGG TTACTCCTCT AGAACTTGAA GATCCCAAAG AGACTCCGTT AAACTTGTAC AGGCCTAAGG AGCCTTATAC GGCAACGATT GTTTCGGTTG AGAGAATTGT TGGTCCACAA GCACCTGGAG AGACTTGCCA CATTGTAATT GATCATGATG GTAATGTTCC ATACTGGGAA GGACAAAGCT ATGGAGTGAT TCCTCCTGGC GAGAATCCTA AGAAACCTGG TGCTCCTCAT AACGTTCGCC TTTATTCGAT TGCATCAACA CGATATGGAG ATTCTTTCGA TGGCAAAACA GCTAGTCTAT GTGAAAAGAA GATCCTTCCT GGTGTATGCA GCAACTTCTT GTGCAATGCC AAACCCGGCG ATAAAGTTAA AATCACTGGT CCATCTGGAA AGGTAATGCT TTTACCTGAA GATGACCCAA AAGCTACTCA CATAATGATT GCTACTGGAA CCGGAGTTGC TCCATACAGA GGATACCTAC GGCGTATGTT TATGGAGAAC GTTCCAAATT TCAAGTTTGA TGGACTCGCA TGGCTCTTCC TCGGTGTGGC TAACTCAGAC AGTCTTCTCT ATGATGAAGA ATTTGCCGGT TACCTCAAGG ACTATCCAGA GAATTTCAAG TACGACAAAG CGCTGAGCAG AGAAGAGAAG AACAAGAAAG GAGGGAAAAT GTATGTGCAG GACAAGATTG AAGAATACAG TGACGAGATC TTCAAACTTC TGGACAATGG AGCTCATATT TACTTTTGCG GGCTTAAAGG AATGATGCCC GGGATTCAAG ACACTCTTAA GAGGGTCGCT GAAGAGCGAG GCGAAAGCTG GGAGCAGAAA CTTACTCAGC TCAGGAAGAA CAAGCAGTGG CATGTTGAAG TGTATTGA 
Length1068
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21539478.. 21540966
Download Sequence
A.thaliana
AGI-codeAT4G05390.1
Descriptionroot FNR 1
TAIR curator summaryEncodes a root-type ferredoxin:NADP(H) oxidoreductase.
Alias[ATRFNR1][RFNR1][root FNR 1]
Gene coexpression
MR
MR Locus Description
14.9666 Ahg473238 F-box family protein
16.9706 Ahg477131 syntaxin of plants 52
17.3205 Ahg327556 RNA-binding (RRM/RBD/RNP motifs) family protein
23.2379 Ahg495015 FAD/NAD(P)-binding oxidoreductase family protein
27.9106 Ahg483748 ubiquitin-conjugating enzyme 6
29.3939 Ahg930399 heteroglycan glucosidase 1
45.1664 Ahg936692 AIG2-like (avirulence induced gene) family protein
50.04 Ahg326738 Transcription factor IIIC, subunit 5
54.6992 Ahg919906 zinc transporter 4 precursor
77.479 Ahg938385 basic leucine zipper 25
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression