Detail



ID : Ahg327556

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|327556|fgenesh1_pm.C_scaffold_6002776
Sequence
ATGAGCAGCC GTTCGAGTAG AACAATTTAC GTCGGAAACC TTCCCGGCGA TATTCGTGAA AGAGAAGTTG AAGATTTGTT CAGTAAGTAT GGACCTGTTG TTCAAATCGA TTTGAAAATT CCGCCGAGGC CTCCTGGCTA TGCATTCGTC GAGTTTGAGG ATGCTCGGGA TGCTGATGAT GCAATTTATG GCCGTGATGG TTATGACTTT GATGGGCATC GTTTACGGGT GGAACTAGCT CATGGTGGGA GGCGTTCATC ACATGATGCA CGCGGCAGTT ACAGTGGTGG TGGTCGTGGC GGTCGTGATG GTGTTGACGG TGGTGGTCGT GGGCGTGGAC CATCTAGGAG ATCCGAGTAC CGCGTTGTAG TGTCAGGTTT GCCGTCATCT GCGTCCTGGC AAGACCTCAA GGATCACATG CGTAAAGGAG GAGAAGTTTG TTTTTCGCAA GTGTTTCGTG ATGGTAGAGG TACAACTGGA ATAGTAGATT ATACCAGCTA CGAGGACATG AAATATGCGA TAAAAAAGCT CGACGACACA GAGTTTCGGA ATGCGTTTTC TCATGGATAT GTTCGGAATA TGATTCAAGG AGGGATTCGA GGAGCCCCAG CCGTGGAAGA TCTTATTCTA AGAGCCGCAG CCGTAGTCGC AGCCGGGGGC GGAGCCCTAG CCGCAGCAGA AGCAGGAGCA AGAGCAGAAG TCCAAAGGCT AAATCTTCAC GTAGATCACC TGCAAAATCT ACATCGAGAT CTCCTCACTC TCGCTCCCGC TCTAAGTCGA GGTCACTGTC TCCACGGGGG TATGCTTAGT TTCCTCTTTA ATGTTTATGC TAAATATCCA ACATAA 
Length846
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22237315.. 22238984
Download Sequence
A.thaliana
AGI-codeAT4G02430.2
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[At-SR34b][SR34b][Serine/Arginine-Rich Protein Splicing Factor 34b]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg471034 glucose-6-phosphate dehydrogenase 4
10.4881 Ahg488026 SCP1-like small phosphatase 5
14.2478 Ahg931204 vaculolar sorting receptor 3
17.3205 Ahg327454 root FNR 1
20 Ahg483567 DNA-binding bromodomain-containing protein
21.4243 Ahg479638 autoinhibited Ca(2+)-ATPase 9
22.5389 Ahg474610 TATA binding protein 2
23.3666 Ahg900011 DNA-binding storekeeper protein-related transcriptional regulator
24.9199 Ahg484897 phosphatidate cytidylyltransferase family protein
33.9117 Ahg494576 Homeodomain-like transcriptional regulator
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression