Detail



ID : Ahg329104

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329104|fgenesh1_pm.C_scaffold_7001331
Sequence
ATGACAAGCA CTCGCAGTGT AGAGGTTAAG GCTACCATCG ATACTGGTCT TCCTTGGAAA GTGGTGGCTA CAAAAGGTAG CAGGAGTTCG ACAAGGCGGA CTAAGAAACA AATTGCACTA GCTGCAGCCC CAGATATTGA GGCAGATTGT AAGACTTCAG CAGGTACCGC AGCAGAAGGA GATTCAGAAT CGGAAAAGCT TGGCGTTTCT GTTCTGGGCC AGCATTTTGC AGAAAGAGTA GAGCATGTTC CAATAAAGAA ACGGAGATTT ATGGTTCCCT CTCCATCACC TTTGAATAAG TCATCTGCTC GTGGTGAAGG CTCAAAACAT CGTTTAGAGA CCAACCATGC TCTGCCTGTT TCGATTTTGA ACCCTAATTT AATGGGACGG AAAACAGCAG AAGTCTCTGA TGATAAACCC GATTGCAGCA GTCATGACTT CTCTGGTATT AAGATACTTG CAGAAGTTGC TTGCAGTAGT GGTATGATTA GTGATATTGC ATCCGCAGCA GACAGTCAGC CTGTTGAACT TGTTCAGCAG CAAGATGCTT TGACCTTATC TACTCATGTG GAAGGTAATG ATTCATCAAC TGGCATTGTC GATGTCTCTG AGAAAGATAC TACAATTGAA TCCAGTGACA AGGTTGGGGA AGACAAGAGC GAAATCATAG TGCCTCTAAA AGTTCTGAAT GATACTTCGG GTAATGCTTT GGCTACTGAT CAGAGTGAAG AACATAGTAT AGTTGCATCT AGTGGTTTGA TAGTGGCTCA GAACATCAGC ATTGCTGTTT CAAATGAATC CTCAACAGAA GGGCCAAAGG AAATTAAGGA AGCTGGTGAT AGCGGAAATT TAGCACCTCA TAATGAGACT GTCACTATGT CAGAGAAATT ATCTGGTGAT GAGCGCACTG GAATGGGTAA GAGCACTGAA TGTCTTACAG ATGATAGGTT ACTCTGGGAT TTAAATCTTC CAACCGATGC GTGGGGTCAA CCTGGTGATG TAGTTGATGA AGTATCCCGA AGATATTCTG ATAGAGAAGT CACTGAGTCT GTTACAGAGA ATGGACATGT TGATGGTAGT AAGGACTATG CGGCTGGCCT GATTGCATCA GATTTGCAGA CGAATTCTCC ATCCCCGTCT GGGCCCAAGG CTGAAGCCTC TGCCCGAAAT GGGAAGGAGT GCCAATCTGG TTATGATTCC CAGTTTGAGG ATGGAGAGTT GAGGGAACCA TACCCTTGGG AAGAAAATGA GGGCGACAGT GGAGATGTTG AACAAGTGGA TTATGGGTCT GAGCCAGAGA ATGAGCGATT CTACTCTTTG GCTGAAAGTA ATGAGAATAA GTTAGAGGAT GTTGAGAAGG GAATCTTGCC AGAGACAAAG TGTGGAGCTG GCAAGTGTGA TTCTGACAAT GTGCATGAAG GAAGTAGTGA TGTAGAGAAG CATGTTGTGA GGGACGTTGG TCCTAATAAA TTTATCGGGA GAGACAGATC AGGCATGCGT ATGCGAAGCA GGAGTCCTGG GAGAGGACAA TTTGGCGGCT GGGATTCCAA ACGTCGCTTC TCCCCACCTA TTTATAAAGG TGGTCAATAC GGTTTTGGAC GTCCCCGTCC TAAAACCGTT GTGGAGGACC GAGTTATGAT GAATGGCTTT AATCAGCCAG GGACAGGCCC TGGCCAAGGC CCACATGGCT ATGTACGTAG GCAGTTCTCA AATGGAGGAT ACCGGGGTCG GTTCAGAAGG TTCCCAGATG GCAGTGGGAA CCGTGATTTC AGAGGTGTTG ATCGCCCCTT TCCTCCCGGT GATGGTAATG ACTATCCAAG TCGCATGCAC AACAACCGGG TGAACAATAG GAGAGAGAGA AGCAACTCCC CTCCTGTCTT CAGGAGATTG CACGACCCTC AATCACGGTC CAGGTCCAGA AGCCGTTCCC CAGGCTCATG GAACGGGCGG AACAGATCTC CTCCTGGGTT CAGGGGTGAT GAAAACAGGA TGGAGAGAGT GAGGTTGCCT TTCCAGAAAC GGTTTCCGCT GGATCAAGAG ATGGGGTTCA TGTCGCCTCC AAGAAACCAA CGAAACTCGA GGTTTTTCGA TGGCAGAAAC AATGATGCGG GTGGGGAGAA TCATCACAAC AACTTGAGGG GAAGAAAATC GCCACCAGGA AGGATGTTTA GACCAGAACA GAGATTTGAC AACAACATGA GAAGAATGAA TTCGGAGAAC AATAATTTCA GACCATTTAT GCGCCATAAT AATAACAATA GAAGGTTTGT TGATGGTGGT GGAAGCCGAG GAGGGTGTAA ATATGAGGGA GTGGAGGAGG AGAAGAATGG GAACGGGAAC AGGTATGAGA TGGCAATGGA AGAAGACGGT GATAACATCC GACGGTTCAG ATTAAACACA GAACAACAAC ACTCTGTTGT TTCCAACAAC AATAACAACA TCGAGGCGTC GTAA 
Length2454
Protein Sequence
Protein Residue
Map Locationscaffold_7: 6540022.. 6542850
Download Sequence
A.thaliana
AGI-codeAT5G52530.1
Descriptiondentin sialophosphoprotein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg484624 Oxoglutarate/iron-dependent oxygenase
2.82843 Ahg949816 dentin sialophosphoprotein-related
3.4641 Ahg471818
4.58258 Ahg496189 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
6.48074 Ahg476847 tubby like protein 1
6.9282 Ahg480601 ubiquitin family protein
7.34847 Ahg474651 ubiquitin-protein ligase 1
7.87401 Ahg350459
8.66025 Ahg481921 ubiquitin-activating enzyme 1
10.6771 Ahg479168 ubiquitin-conjugating enzyme 32
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression