Detail



ID : Ahg350459

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350459|fgenesh1_pg.C_scaffold_6001052
Sequence
ATGGAATCTT CTCCGGCTTC GTCTTCGTCT CCGACGCCGG TAACCGATTC GTCTGCTGAT ACTTTAGCGA AAGATCTGCA GAATCAAAGT CTTGGAGCTG TTGATGAAGG TTGTAAGATT AAAAAGAAGC TCGAAGATTT TAACTGGGAC CATTCCTTTG TTAAGGAATT GCCTGGTGAT CCCAGAACCG ATGTTATCTC GCGTGAGGTA TTACATGCTT GCTATTCAAA AGTTTCACCA TCAGTAGAAG TAGATGATCC TCAGCTTGTA GCATGGTCTG AATCTGTTGC AGAGCTATTG GATTTGGATC CTAAAGAGTT TGAAAGGCCA GATTTCCCTC TCATGTTGTC CGGTGCTAAA CCTTTACCAG GAGCAATGCC TTATGCTCAA TGCTATGGAG GACACCAGTT TGGCATGTGG GCTGGACAAC TAGGTGATGG ACGTGCCATA ACTCTGGGAG AAGTTTTGAA CTCCAAAGGT GAAAGATGGG AACTTCAGCT TAAAGGTGCG GGTAGGACTC CATATAGCCG TTTTGCTGAT GGGCTTGCAG TGCTCCGTAG TAGCATCAGG GAGTTCCTTT GCAGTGAAAC TATGCATTGT CTTGGAATCC CTACCACGCG CGCCCTTTGT CTTCTCACCA CAGGTCAAGA TGTCACTCGC GACATTGGCA ATCCGAAGGA AGAACCTGGC GCAATCGTTT GCAGGGTTTC TCAGTCATTT ATCCGCTTTG GGTCATACCA AATACATGCT TCTAGAGGAA AAGAGGATCT TGACATTGTT AGGAAGTTGG CAGACTATGC CATTAGACAT CATTTCCCAC ATATAGAGAG CATGGATCGA AGCGATAGCT TGTCTTTCAA AACCGGTGAT GAAGATGATT CGGTTGTGGA TCTAACTTCC AACAAGTATG CAGCATGGAT CGTTGAAATT GCTGAGCGTA CAGCTACCTT AGTTGCAAGA TGGCAAGGTG TAGGTTTCAC CCATGGTGTG CTCAACACTG ACAATATGAG CATTTTGGGT CAAACCATTG ACTATGGCCC ATTTGGGTTC TTGGATGCTT TTGATCCAAG TTACACCCCA AACACGACAG ATCTCCCAGG AAGAAGATAC TGTTTTGCAA ATCAGCCTGA CATCGGCTTG TGGAATATTG CTCAATTTTC TAAGACTCTG GCGGTTGCTC AGCTGATAAA TCAAAAGGAG GCGAATTACG CCATGGAAAG GTACGGTGAT AAATTCATGG ATGAGTATCA AGCCATAATG TCAAAGAAGC TTGGTCTTTC CAAGTATAAC AAGGAGGTCA TTAGTAAACT TCTGAACAAT ATGTCTGTTG ATAAAGTTGA TTACACAAAC TTCTTCCGGC TTCTTGCAAA TGTAAAAGCA AATCCCAACA CACCTGAAAA TGAGTTATTG AAACCCTTGA AAGCTGTGCT CTTGGACATC GGAAAGGAGA GAAAAGAAGC ATGGATCAAA TGGATGCGAA GCTATATACA AGAGGTGGGT GGTAGTGAGG TATCAGATGA AGAAAGAAAA GCAAGAATGG ATTCGGTAAA CCCAAAGTAC ATTCTGAGGA ACTATCTGTG CCAAAGCGCA ATAGATGCAG CTGAACAAGG CGATTTCTCA GAAGTCAACA ATTTGATCCG TCTAATGAAA CGGCCTTATG AGGAACAGCC GGGTATGGAG AAATATGCTC GGTTGCCTCC AGCCTGGGCT TACAGGCCAG GCGTCTGCAT GCTTTCTTGT TCCTCCTAG 
Length1749
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5019466.. 5022538
Download Sequence
A.thaliana
AGI-codeAT5G13030.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.87401 Ahg329104 dentin sialophosphoprotein-related
8.30662 Ahg919661 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
9.69536 Ahg942756 NAD(P)-binding Rossmann-fold superfamily protein
10.247 Ahg489045 Tetratricopeptide repeat (TPR)-like superfamily protein
19.3649 Ahg927471 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
19.6214 Ahg483376 citrate synthase 3
23.6643 Ahg946622 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
25.2982 Ahg473553 Smg-4/UPF3 family protein
26.2679 Ahg950495 GTP-binding protein, HflX
29.3258 Ahg488897 AAA-type ATPase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression