Detail



ID : Ahg496108

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496108|fgenesh2_kg.8__1924__AT5G59750.1
Sequence
CCTTAAAAAA ATGTCTGAAA TTCTTAAATT TTCAGATTTG GGTTTTGTGT TGAAAACAAC TCCAAGGAGA CGAGAAGCCG AGCGAATCGT ACGAAGAAAG AGATATATGT TTCATTACGT AGATGATGGA TTCTGCTTTA TATCATCATC CTCGAATCTT TTTCGCTCAC AGCTTCATCA ATGGCTCGTA TAGGTCACCT ATGTTTGCTA ATACTTGCTG GAGATTGAGT GATGGTTCAC GTTGGAAGAT CAAGGCTAGT GAGAATAGTG ATCGCAACGT GTTCGACGAA AGTCCTGTGA GAGGAACCGA CGAGTCGTTG TTTGATTCTG TTGACGCGGA AATCACTCCT GAGACTGATG ATTTCTTTGT GAGTGACGCA GAGGGTGATC CAGATTGTCC TTCTCAAGGT TATTCCTCTG TTGAATATGC TCTTCAAGCT TTACGCAAAG GAAAGTTTGT GATCGTTGTT GACGATGAAA ATGGGGATGT TGAAGGGAAT CTGATTATGG CGGCATCTCT AACGAGTCCA AAAGATATAG CCTTTCTGAT TAAGAATGGT TCTGGAATTG TCTCAGTTGG GATGAAGAAA GAATACCTCG AAAGATTAAG CCTTACACTC ATGTCACCTG AAATGGAAGA CGAAGATTCC TCTGCTCCAA CTTTCACTAT CACTGTGGAT GCAAAATCCG GAACATCAAC TGGAGTATCA GCTTCAGACA GGGCGATGAC GGTTCTTGCA CTTTCGTCCC TCGAAGCTAA ACCAGATGAT TTCAGGAGGC CTGGTCATGT ATTCCCTCTC AAGTACAGAG ATGGTGGAGT TTTAAGGAGA GCCGGTCACA CTGAAGCTTC AGTGGATCTA ATGATATTGG CTGGTTTACG TCCTGTCTCT GTTCTTTCAG CTATTCTTGA TCAAGAAGAT GGGTCAATGG CTTCACTACC TTATATGAAA AAGCTTGCTA CAGAACATGA CATTCCCATT GTATCGTTGA CTGATCTAAT CAGATATCGA AGAAAGCGAG ATAAGCTTGT GGAGAGAATC ACGGTGTCTC GTTTGCCTAC CAAATGGGGT CTTTTCCAAG CTTATTGTTA TCGATCTAAA CTCGATGGAA CCGAGAATAT CGCCCTCGTT AAAGGAAACG TTGGAAATGG TGAGGACATT CTGGTACGAG TGCATTCAGA GTGCTTAACA GGAGACATTT TTGGCTCAGC GCGGTGTGAC TGTGGAAACC AATTGGATCT AGCCATGGAG CTAATCGAGA AAGAGGGAAG AGGAGTCGTT GTGTATCTTC GTGGCCACGA AGGAAGAGGC ATTGGCCTTG GTCACAAGCT TAGAGCTTAT AACTTGCAGG ACGAAGGACA CGACACTGTT CAGGCCAATG TTGAACTTGG CCTATCCATT GATTCTCGTG AATACGGTAT CGGTGCTCAG ATGCTAAGGG ACATAGGAGT GAGAACAATG AGACTGATGA CGAATAACCC CGCCAAGTTC ACAGGTCTGA AAGGGTACGG ACTCGCTGTA GTTGGCCGTG TGCCAGTGGT GACACCAATC ACCAAGGAGA ACAGAAGATA TATGGAGACC AAACGCAAGA AGATGGGTCA CATTTATATC TCTGATAACA ACGATCAGCC TTTGGCTTGA CCAAAAGCCT TTGATAGAAA CGAACACTTT TGAATTTTGT ATTTATAAAT TGATTCATTC TTATGTAATC ATCAACCATA AATTACTTTT TTCTGGAA 
Length1738
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18065832.. 18068073
Download Sequence
A.thaliana
AGI-codeAT5G59750.2
DescriptionDHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
TAIR curator summary
Alias[AtRIBA3][RIBA3][homolog of ribA 3]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg492400 CRT (chloroquine-resistance transporter)-like transporter 2
4 Ahg941391 CHY-type/CTCHY-type/RING-type Zinc finger protein
5.2915 Ahg485991 DHFS-FPGS homolog D
6 Ahg949484 ferric reduction oxidase 6
6 Ahg928405 Protein of unknown function (DUF760)
7.2111 Ahg481103 Peroxidase superfamily protein
7.34847 Ahg489002
9.16515 Ahg329483 Pentatricopeptide repeat (PPR) superfamily protein
9.21954 Ahg484500 chloride channel B
9.48683 Ahg489136 magnesium (Mg) transporter 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression