Detail



ID : Ahg329638

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|329638|fgenesh1_pm.C_scaffold_7001865
Sequence
ATGCAGAAAT TGGCTGATTT CAAGCTTCCT CAATTCTTCA ATTATCCTCC ATACTTCACT TTGCAGCCTG TGAGGGACAC GCGTGAGAAG CAAATACAGC TCTGGAAAGA ACTTATTTTG GATTACTGCA AATCTCAAAA GATTTTCTTG ATTGGCGTTG AAGAAGATTT CCCTCTCTTC TCAAACTCTG CCATTGATAG ATCTCTAAGT CATGAAGCAA GGGAAACATT TCTCTCTGCC ATTGTTGGAG AAGGGCGTGC AGAGTGGTTA GATAAAGGGC ATAGGAAATG TCTGATTCTG TGGCACCGGA TTCAAGATTG GGCAGACATT ATTCTTCAGT TTGTGAGAGA TAATGGATTA GAGGACAGTG TTATGACTGT TGAAGAAATA CGTTCAGGGA CAGAATCACT TGGAACAGAA CTTCAAGGGA TCGATCGGAC GATTCTAATG AGGGCTTTAA AGCTTCTAGA GAACAAGGGC AAGCTTGCAT TGTTCAAGGG AACATCAGCA GATGATGAAG GCGTCAAGTT CTCTGTCTGA 
Length540
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9780090.. 9781180
Download Sequence
A.thaliana
AGI-codeAT4G19003.2
DescriptionE2F/DP family winged-helix DNA-binding domain
TAIR curator summary
Alias[VPS25]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg474398 Transducin/WD40 repeat-like superfamily protein
15.0997 Ahg478051 NagB/RpiA/CoA transferase-like superfamily protein
18.7083 Ahg926296 short hypocotyl in white light1
19.7484 Ahg491300
23.0217 Ahg952276 Ribosomal protein S16 family protein
25.923 Ahg493797 Pectin lyase-like superfamily protein
29.5804 Ahg486142 embryo sac development arrest 7
29.8831 Ahg353533
35.3129 Ahg494970 Heat shock protein DnaJ, N-terminal with domain of unknown function (DUF1977)
37.47 Ahg495194 VEFS-Box of polycomb protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression