| Annotation |
|---|
| Description | jgi|Araly1|331395|fgenesh1_pm.C_scaffold_8000738 |
| Sequence |
ATGGTGAAGG TCCGTATGAA CACGGCGGAC GTCGCCGCAG AGGTCAAGTG CTTAAAGCGA TTAATCGGTA TGAGATGCTC CAACGTCTAT GATATATCTC CCAAGACGTA TATGTTCAAG CTCTTGAATA GTAGCGGTAT CACAGAATCT GGTGAAAGTG AGAAAGTTTT GCTTTTAATG GAAAGTGGTG TTCGTTTGCA TACCACTGCT TATGTCAGGG ATAAGAGTAA TACTCCATCT GGGTTTACTT TGAAGTTGAG GAAACATATC AGGACTAGGA GGCTTGAGGA TGTTCGACAG CTTGGTTATG ATAGGATCAT TGTCTTCCAG TTTGGGCTAG GTGCTAATGC TCACTATGTT ATATTGGAGT TGTATGCTCA AGGAAACATA ATTCTTACTG ATTCTGAGTA TATGATCATG ACACTCCTCC GGTCTCATAG AGATGACAAT AAGGGTTTTG CTATCATGTC TCGTCACCGT TACCCCATAG AGATATGTAG AGTTTTTGAG AGAACCACTG TTTCAAAGCT TCAGGAATCA CTTACTGCTT TCTCGCTTAA GGATCATGAA GCAAAACAGA TTGAACGGAA GGAGCAGAAT GGTGGCAAAA AGGGTGGGAA GTCAAATGAT TCTACGGGTG CCAAACAATA TACCTTGAAG AATATTCTTG GTGACGCTTT AGGCTATGGG CCACAGCTCT CAGAGCACAT TATTCTGGAT GCTGGTCTAA TTCCAACTAC CAAACTTTCA GAAGATAAGA AGTTAGATGA TAATGAAATT CAGTTATTGG TTCAAGCGGT GATCGTTTTT GAAGATTGGC TTGAAGATAT TATAAATGGT CAAAAAGTTC CTGAAGGTTA TATTCTAATG CAAAAACAAA TTTTGGCAAA TGACACGCCT TCTGAATCAG GAGGTGTTAA AAAGATGTAT GATGAGTTCT GTTCAATCTT ATTAAATCAA TTCAAATCAC GAGTGTATGA AAAGTTTGAA ACTTTCGATG CGGCTTTAGA TGAGTTCTAC AGCAAAATTG AGAGCCAAAG GTCTGAACAA CAACAAAAGG CAAAAGAAGA TTCTGCCAGT CAGAAACTCA ATAAGATTCG CCAGGATCAG GAGAACCGTG TTCAAATTCT GAAGAAAGAA GTCAACCATT GTGTTAATAT GGCTGAATTA ATCGAGTACA ACTTAGAAGA TGTAGATGCT GCCATATTAG CTGTTCGTGT AGCACTTGCA AAGGGTATGG GCTGGGATGA TCTAGCTCGC ATGGTCAAGG AAGAAAAAAA ATTAGGAAAT CCTGTTGCTG GACTCATTGA TAAACTTTAT CTGGAGAAGA ATTGCATGAC CTTGTTGTTG TGCAACAATC TCGATGAAAT GGATGATGAT GAGAAGACGC TCCCAGTGGA AAAGGTGGAG GTGGATTTAT CACTTTCTGC GCATGGTAAT GCTAGGCGCT GGTATGAAAT GAAGAAGAAG CAAGAAACCA AACAGGAAAA GACTGTTTCT GCTCATGAAA AGGCTTTTAG AGCAGCTGAG AAAAAGACAC GCCACCAGCT TTCTCAGGAA AAAGTGGTTG CAACTATTTC ACACATGAGA AAAGTCCACT GGTTTGAGAA ATTTAATTGG TTCATTAGCA GTGAGAACTA CTTGGTCATC AGTGGTCGTG ATGCTCAGCA AAATGAGATG ATAGTTAAAC GTTACATGTC AAAAGGAGAT CTGTATGTAC ACGCAGAGCT TCATGGAGCG TCTAGTACTG TGATAAAGAA TCATAAACCT GAACAAAATG TACCGCCTCT CACTTTAAAC CAAGCTGGAT GTTTTACGGT TTGTCATAGT CAGGCCTGGG ATTCCAAGAT TGTTACTAGT GCATGGTGGG TTTATCCTCA TCAAGTCACT AAAACAGCTC CGACTGGAGA ATACCTTACA GTTGGAAGTT TTATGATACG TGGTAAGAAA AACTTCCTTC CGCCACACCC ACTCATCATG GGTTTTGGAT TGTTGTTTCG TTTGGACGAG AGCTCCTTGG GAGCTCATTT GAATGAGAGA AGGGTAAGAG GGGAAGAGGA AGGAATGAAT GATGTAGTCA TGGAAACGCA TGCTCCTGAT GAGCATTCAG ATGCTGAGTC AGAGAACGAA GCAGTGAATG AAGCGGTTTC TGCCTCAGGA GAAGTTGATT TGGAGGATTC AAGTACCATA TTGAGCCAAG ATACTTCTTC TTTTGACATG AATTCATCTG GTATTGCTGA AGAAAATGTT GCATCAGCCA CCTCACAGCT TGAATATCTT CTTGATAGAA CCCTAGGTCT TGGTGCTGCA ACGGTGGCAG GCAAGAAAGG TACAATAGAG ACATCAAAAG ATGAAATGGA AGAGAAGCTG ACACAGGAAG AGAAAAAAGC AGTAGTGAGA GATAAGCCTT ATATGTCAAA AGCTGAAAGA AGAAAGCTTA AGATGGGCCA AAGTGGTAAC ACAGCTGTTG ATGGTAAGAC TGGGCAAGAA AAGCAGCAAC GAAAGGAAAA AGATGTTTCT TCTTTAAGCC AAGCTAACAA GAGTATACCT GATAACAAGC CAGCTGGGGA AAAAGTTAGC CGTGGGCAAA GGGGTAAACT TAAGAAAATG AAGGAGAAGT ATGCTGATCA AGATGAAGAC GAAAGAAAAA TACGGATGGC ATTGTTGGCG TCGTCTGGAA AGCCACAGAA GACTGATGTT GAATCACAGA ATGCAAAAAC CGCAGTCACC GTAGAGAAGA AACCTTCTGA AGAGACAGAA GATGCTGTGA AAATATGTTA CAGGTGTAAG AAGGTTGGAC ATCTTGCTAG GGATTGTCAT GGGAAAGAAA CTTCAGAGAT GGACAAAGTG GTGATGGAAG AAGACGATAT TCACGAGGTT GGGGACGAAG AGAAAGAAAA ACTGATTGAT GTCGATTACC TAACTGGTAA CCCGTTACCA ACCGACATCC TTTTATATGC GGTCCCTGTG TGCGGCCCCT ACAACGCTCT GCAGTCATAT AAATACAGAG TCAAAGCGAT TCCAGGCAGC ATGAAGAAAG GAAAAGCTGC AAAAACTGCA ATGAATCTGT TCACACATAT GACGGAGGCG ACAGTAAGGG AGAAAGAGCT AATGAAGGCA TGTACAGATC CGGAGCTGAT GGCTGCTCTT GTCGGGAATG TGAAGATCAC AGCAGCAGGT TTGACACAGT TGAAGCAGAA ACAAAAAAAG GGCAAAAAAA GCGGGAAACA ACAACATAGC TAG |
| Length | 3243 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 12815997.. 12820528 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G49930.1 |
| Description | zinc knuckle (CCHC-type) family protein |
| TAIR curator summary | |
| Alias | [emb1441][embryo defective 1441] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.74166 |
Ahg488545 | binding partner of acd11 1 |
| 7.61577 |
Ahg484347 | Protein kinase superfamily protein |
| 11.0905 |
Ahg491287 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 12.8452 |
Ahg916985 | |
| 13.4164 |
Ahg330245 | acetyl-CoA synthetase |
| 14.4222 |
Ahg494293 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 15.7162 |
Ahg951497 | SKP1/ASK1-interacting protein 2 |
| 18.1384 |
Ahg323999 | Structural maintenance of chromosomes (SMC) family protein |
| 19.4936 |
Ahg333056 | Chaperone DnaJ-domain superfamily protein |
| 23.0434 |
Ahg492083 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|