Detail



ID : Ahg332278

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332278|fgenesh1_pm.C_scaffold_8001621
Sequence
ATGGATAAGA GCTCCCTTGT CTCTGATTTC CTCTCCTTTC TCAATGCTTC TCCCACCGCT TTTCACGCCG TCGACGAGTC AAAGAGGCAG CTTGTAAAAG CTGGGTATGA ACAGATTTCA GAGAGAGATG ATTGGAAACT CGAAGCCGGC AAAAAATACT TCTTCACCAG AAATTACTCC ACTATTGTTG CTTTTGCCAT TGGTCAAAAA TACGTAGCTG GAAACGGGTT CCATATTATT GGAGCTCACA CTGATAGTCC TTGCCTCAAA TTGAAACCTG TATCCAAGAT AACTAAAGGT GGATGCTTGG AGGTTGGTGT TCAAACATAT GGAGGTGGAC TCTGGTACAC CTGGTTTGAT CGTGACTTGA CTGTTGCAGG ACGTGTTATT CTAAAAGAGG AGAAAGCAGG TTCTGTCTCG TATTCTCATC GCCTTGTCAG GATTGAGGAT CCTATCATGA GGATCCCTAC CTTGGCCATT CACTTGGACA GGAATGTGAA CAGTGAAGGT TTTAAGCCAA ACACTCAGAC ACACCTCGTT CCATTACTGG CAACAGCTAT CAAGGCGGAG CTCAATAAAA CGCCAGCAGA AGGTGGTGAA CATGACGGAG GAAAGAAGTG TGCTGAAACT AGTTCAAAAT CAAAGCATCA TCCGCTTCTA ATGGAGATCA TAGCAAACGC ACTGGGTTGT AAACCTGAGG AGATATGCGA CTTTGAGCTG CAAGCATGTG ACACTCAGCC AAGTATACTA GCTGGTGCAG CTAAAGAATT TATTTTCTCG GGAAGGCTAG ATAATCTCTG CATGTCATTT TGCTCTCTGA AGGCACTTAT AGATGCAACG TCTTCTGGAA GTGACTTAGA GGAAGAAAGC GGAATAAGAA TGGTGGCACT ATTTGATCAT GAAGAAGTTG GCTCCAATTC AGCGCAAGGA GCTGGATCCC CTGTCATGAT TGATGCTATG TCACACATCA CAAGTTGCTT CAGCTCTGAC ACTAAGGTGC TCAAGAAAGC GATTCAAAAA AGTTTGCTCG TCTCTGCTGA TATGGCACAT GCTTTACATC CAAACTTTAT GGATAAACAC GAAGAGAATC ATCAGCCGAA GATGCACGGA GGACTTGTCA TCAAACACAA TGCAAATCAA CGTTACGCTA CCAATGCCGT AACTTCCTTT GTATTCAGAG AGATAGCAGA GAAGCATAAT CTGCCTGTTC AGGATTTTGT GGTACGTAAT GATATGGGTT GCGGATCGAC CATTGGTCCA ATCCTAGCAA GCAGTGTGGG GATAAGGACG GTTGATGTTG GAGCTCCTCA GCTCTCGATG CATAGCATCC GTGAGATGTG TGCTGCAGAT GACGTGAAGC ATTCATATGA CCACTTTAAA GCTTTCTTTC AAGAGTTCAC TCACCTTGAC GCTAAACTCA CTGTCGACGT TTGA 
Length1434
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18236759.. 18239565
Download Sequence
A.thaliana
AGI-codeAT5G60160.1
DescriptionZn-dependent exopeptidases superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg939394 methyl-CPG-binding domain 4
2.82843 Ahg936501 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
4.89898 Ahg470311 Small nuclear ribonucleoprotein family protein
6.63325 Ahg488722
7 Ahg478823 RNA-binding (RRM/RBD/RNP motifs) family protein
10.583 Ahg480636 ribonuclease II family protein
11.6189 Ahg940565 Tudor/PWWP/MBT superfamily protein
12.4499 Ahg483031 RNI-like superfamily protein
14.8324 Ahg471912 Family of unknown function (DUF572)
16.1555 Ahg317971 ubiquitin-specific protease 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression