Detail



ID : Ahg480636

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|480636|fgenesh2_kg.3__3337__AT2G17510.1
Sequence
CTCCGTTCTG ACGACTGAAA ACTTCTTCAC CGGCGAACTC GAAATTTTTC CAGCAAGAAA TTGAAGATGT TGCAGAGCAA AGTTTTCAAT AAGAAAACCA GAGGAGGAAG AATCCAAAAG CAAGTAAGAG AGGTTTATCT AAGAGATGAC ATATACTGTG GAGCTTTTTC TTGCAAGTCT TGTGATTCTT CAGCTGCTCG TTTGTCTTCC CCTAAGATTC TTGTTGTAGA CACCAACGTC GTTCTTCACC AAATTGATTT GTTGGAAAAT CAAGCTATAG ACAGTGTTGT TGTTCTGTCT GTGGTGCTGG ACGAGGTTAA GAACAGGAAT AGATCTGTTT ACAACAGAAT TAGAGCTCTC TGCAGCAATC CAACCAGACA GTTCTATGTT TTTTCCAATC ATGTCCACAA GGATACTTAT GTGCAGGCCA TGGAGAAAGA GAGTGCCAAT GACCACAACG ATAGAGCTAT TCGCGTCGCT ACGCTATGGT ACCAGAAGCA TCTAGGGGAT ACATCTCAGG TGTTGCTTGT AACTAATGAT AGGGAAAATA AAAGGAAGGC CACTGAAGAG GGAATATCTG CAGAGACAAT TGAGGCTTAC GTTAAATCAA TTGGACAACC TGAATTATTG GATCTGCTTG CCCAACCAAC CAATGAAGAC GTAACTATGG AAGATGCAGA TGATTCTAGA CCTTCGAAGA GGAAACTTAT ATACCAAGAG CATAAGCCCA TGTCTGAGAT TACTGCTGGC TTACACCGTG GAATATATCA TCAAGGAAAA CTCCGTGTCA ATCGTTTCAA TCCTTTCGAA GCGTATGTTG GAAGTGAGAG CATTGGCGAA GAAATAATTA TCTATGGGCG CAGCAACATG AACAGGGCTT TCGATGGTGA TATTGTTGCG GTCGAACTCT TGCCTCGCGA TCAATGGCAA GAGGAAAAGG CATTATCTAT AGCTGAAGAA GATGATGAAG AGGACGATAC TGTTCATTTG GCTCCCAACA GTGCTGATGA TGCTCCTAGA ACCTCAAATT TATCCCAGGA AACTTCTGGG GATAAAAATG CTACCCCTGC TCGTCCATCG GGTCGTGTAG TCGGTGTTAT CCGTAGAAAT TGGCACTCCT ATTGTGGATC TCTTGAACCA ATGTCACTAC CGGCTGGTAG TGGTGGAACG GCGCATGCTT TATTTGTCTC TAAAGATCGC AGAATTCCCA AGATTCGCAT TAATACTCGA CAGCTGCAGA ACCTTTTGGA TATGAGGATA GTAGTGGCAG TTGATTCTTG GGACCGTCAA TCTCGATATC CTTCTGGTCA TTATGTACGA CCAATCGGCA AAATAGGTGA CAGGGAAACT GAAACAGAGG TTGTATTGAT AGAGAATGAT GTTGACTACT CGCCATTCTC TTCTCAAGTT CTGGCATGCT TGCCACCCTT ACCCTGGTCT GTATCTCCTG AAGACGTATC CAATCCTATC AGGCAAGACT TACGACATTT GCTTGTCTTT AGTGTGGACC CTCCGGGTTG CAAGGATATT GATGATGCAC TACACTGTAC ATCGCTTCCA AACGGGAACT TTGAACTTGG AGTCCACATT GCTGATGTAA CAAATTTTGT TCACCCTGGT ACTCCTTTGG ATGATGAGGC ATCAAAAAGA GGCACATCTG TCTACCTTGT TGAGCGTCGT ATTGACATGC TTCCCAAGCC TTTAACTGAA GATATTTGCT CGCTTAGAGC TGATGTGGAA AGGCTTGCAT TCTCGGTTAT TTGGGAAATG AGCCCTGACG CTGAGATTAT CTCAACGAGA TTCACAAAGA GTATAATCAA GTCTTCTGCA GCATTGTCTT ATGTTGAAGC TCAGGCTCGG ATGGATGACA GCCGATTGAC AGACTCCCTG ACTACAGATC TGAGGAACAT GAATACTTTG GCAAAGATAA TGAGGCAAAG GCGTATCGAT AGGGGAGCCT TAACTCTTGC TTCTGCTGAA GTCAAATTTC AGATTGATAC CGAGACTCAT GATCCTCTCG ACATTGGCAT GTATCAGATT CGTGAAGCAA ATCAAATGGT TGAGGAATTC ATGCTTGCTG CAAATGTTTC AGTGGCTGGA CAAATCCTTA AACTATTCCC TTCTTGTTCA CTATTAAGGC GTCATCCTAC TCCAACAAGA GAAATGCTTG AACCACTGCT GCGTACTGCT GCAGCTATTG GATTGACCTT AGATGTCTCT TCATCTAAAG CTTTGGCTGA TTCACTGGAC CGAGCTGTGG GTGAGGATCC ATATTTCAAC AAGCTGATCA GGATATTGGC AACTAGGTGC ATGACACAGG CTGTGTACTT CTGTAGTGGG GATCTCACTC CTCCAGAATA TCATCATTAT GGACTTGCAG CACCCCTGTA TACTCATTTT ACATCCCCGA TCCGGAGATA TGCCGATGTC TTTGTGCACA GGCTACTTGC CGCTTCACTT GGAATATACA AGCTTCCAAC AGTGTTCCAA GATAGACCTC AACTTACTAG TGTTGCTGAT AATTTGAACT ATCGGCATAG GAATGCCCAG ATGGCAAGTC GAGCTTCAGT AGAGCTTCAC ACTCTCATCT ACTTCAGAAA CCGACCCACA GATGCAGAGG CGAGAGTTGT GAAGATAAGA TCCAATGGTT TTATAGTATT CGTCCCGAAG TATGGAATCG AAGGCCCTGT TTACTTAACT GGAAAGGGAG AGAAAGGAGC TGGTGAATGG TATGTAGATG AGGAGAAGCA GAAGATTGTT AAGATGGATG GAAGTTTATC TTACAGTGTC TTGCAAACAG TGAAGATTCA CATGGAGGTA GTAGAGCCTC AGCCCAACCG ACCGAAACTC CAACTCACTC TCTTGTAAAA CTCTTCAACC TTGTAGTTTC ACTTTCACTT GTGTACCGAT GTCAAGAGTT CAGGTGCTTT TCTTTGTGTT CATTGTCGAA GTCAAAGACA TTGTATCATC ATTTCATTAT CTATAGATGG ATGCGAGTTT TGGGAGGTGC ATCACTTTTG ATCC 
Length3024
Protein Sequence
Protein Residue
Map Locationscaffold_3: 20856124.. 20862877
Download Sequence
A.thaliana
AGI-codeAT2G17510.2
Descriptionribonuclease II family protein
TAIR curator summary
Alias[EMB2763][EMBRYO DEFECTIVE 2763]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg475759 Arginyl-tRNA synthetase, class Ic
4.89898 Ahg482583 translocase inner membrane subunit 44-2
5.47723 Ahg479745 Eukaryotic rpb5 RNA polymerase subunit family protein
8.24621 Ahg480005 Helicase/SANT-associated, DNA binding protein
8.66025 Ahg313639 nuclear RNA polymerase A2
10.583 Ahg332278 Zn-dependent exopeptidases superfamily protein
13.8564 Ahg480888 26S proteasome regulatory subunit S2 1A
14.8324 Ahg471077 U2 small nuclear ribonucleoprotein A
17.2916 Ahg470511 NAD(P)-binding Rossmann-fold superfamily protein
18.6548 Ahg949010 exoribonuclease 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression