Detail



ID : Ahg939394

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939394|scaffold_503585.1
Sequence
TACTAAAAGG GGGAAGTGAG ATGGAGGCAG ACGAGATCGC AAAACCAGCG AAACCAAAAG CCAAGAAAGA CACTGCGCCA GGGAGGTTGA TCGATACCTA TGCTGCACAA TGCGAAAACT GTCACAAGTG GAGGGTGATT GATAGCCAAG AGGAGTATGA GGATATCAGA AGTAAAATGC TTGAGGACCC TTTTAACTGT CAGAAGAAAC AGGGCATGTC CTGTGAAGAG CCTGCTGATC TTGACTATGA TTCCTCAAGG ACTTGGGTCA TCGACAAGCC TGGTCTCCCC AAAACGCCTC AAGGTTTCAG GAGGAGCTTA GTCCTCAGGA AAGACTACTC TAAGATGGAT ACCTACTATT TTACTCCAAC CGGGAAGAAG CTGAGGAGTC GCAATGAAAT CGCAGCCTTT GTTGAAGCCA ATCCGGAATT CAAGAACGCA CCCCTCGGAG ACTTCAATTT TACTGTCCCC AAGGTCATGG AAGATACTGT TCCTCCTGAT CCTAAGCTTG CCTCTCCTAT TTCTACCACT ACTACAGAGA AGAGCAGTTT CAAGCAGATC CAAGGCTAAT ATGTTCTCCG TGTATCCCA 
Length589
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19874837.. 19875840
Download Sequence
A.thaliana
AGI-codeAT3G63030.1
Descriptionmethyl-CPG-binding domain 4
TAIR curator summaryProtein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
Alias[MBD4][methyl-CPG-binding domain 4]
Gene coexpression
MR
MR Locus Description
1 Ahg332278 Zn-dependent exopeptidases superfamily protein
3.87298 Ahg470771 Transcription factor IIA, alpha/beta subunit
4.24264 Ahg491340
5.65685 Ahg938681 Tetratricopeptide repeat (TPR)-like superfamily protein
9.48683 Ahg352054 Uncharacterised conserved protein UCP009193
10.7238 Ahg940565 Tudor/PWWP/MBT superfamily protein
11.7473 Ahg484013 Lung seven transmembrane receptor family protein
12.4097 Ahg944149 Remorin family protein
13.0767 Ahg479619 translocation protein-related
15.2315 Ahg481139 peroxisomal NAD-malate dehydrogenase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression