Detail



ID : Ahg332328

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|332328|fgenesh1_pm.C_scaffold_8001671
Sequence
ATGGCTCACA ACCATTCTAA TGAAGAAGGC TCCATTGGAA CCTCCTTGCA TGGAGTTACA GCAAGAGAAC AAGTCTTCTC TTTCTCCGTC GATGCTTCGT CTCAAACCGT CCAATCCGAC GACCCAACGG CTAAATTCGC CCTTCCCGTT GATTCTGAAC ATCGTGCCAA AGTGTTCAAC CCACTCTCAT TTGCAAAACC TCACATGAGA GCATTTCACT TAGGATGGCT CTCTTTCTTC ACTTGCTTCA TCTCAACCTT CGCGGCCGCA CCATTAGTCC CCATCATCCG CGACAACCTC GACCTCACCA AAACCGACAT TGGGAATGCC GGAGTCGCCT CCGTCTCTGG CGCCATTTTC TCACGGTTAG CCATGGGAGC GGTTTGCGAT CTCCTTGGTG CGCGTTTTGG GACTGCCTTC TCCCTCATGC TAACAGCCCC AATCGTCTTC TCAATGTCAT TTGTGGGTGG CCCCAGCGGA TACTTAGGCG TCCGGTTCAT GATCGGATTC TGCCTCGCCA CGTTTGTGTC GTGCCAGTAT TGGACCAGCG TCATGTTCAA CGGTAAGATC ATAGGACTAG TGAATGGCTG TGCCGGCGGG TGGGGTGATA TGGGCGGTGG AGTGACTCAA CTCCTCATGC CGATGGTCTT CCACGTCATT AAACTCGCCG GAGCCACTCC GTTCATGGCG TGGCGCATAG CTTTTTTCGT TCCCGGATTT CTTCAAGTTG TTATGGGCAT TCTCGTCCTC AGTCTCGGCC AAGATCTCCC TGACGGTAAC CTAAGTATAC TTCAGAAGAG AGGTCAAGTC TCTAAAGACA AATTCTCCAA GGTTTTCTGG TTTGCTGTGA AGAACTACAG AACATGGATT TTATTCGTTC TTTATGGATC TTCCATGGGA ATTGAATTAA CTATCAACAA CGTTATCTCC GGATATTTCT ACGACAGGTT TAACCTTAAG CTTCAAACAG CTGGTATCGT AGCAGCCAGC TTTGGAATGG CTAACTTCAT TGCCCGTCCC TTCGGTGGTT ACGCTTCTGA TGTAGCGGCT CGGATTTTTG GAATGAGAGG CCGGTTATGG ACCTTATGGA TCTTTCAAAC CGTAGGAGCT CTTTTCTGTA TCTGGCTAGG TCGAGCTAGT ACACTTCCCA TAGCAATCTT AGCAATGATG CTCTTCTCAG TCGGGACACA AGCAGCTTGT GGAGCCCTCT TCGGGGTTGC GCCTTTTGTC TCGCGCCGCT CTCTAGGGCT CATATCGGGA CTAACCGGCG CAGGAGGAAA CTTTGGGTCC GGTTTGACTC AACTGCTTTT CTTCTCATCA TCGAGGTTTA GTACAGCGGA AGGGCTCTCG TTGATGGGCG TTATGGCAGT TTTGTGCACG ATCCCGGTTG CGTTTATACA TTTTCCGCAA TGGGGAAGCA TGTTTTTAAG ACCGTCGAGC CATGGAGAAA GATCGCAGGA AGAATATTAT TACAGTTCCG AGTGGACTGA GAACGAGAAA CAACAAGGAT TGCACGAAGG AAGCATCAAA TTTGCTGAGA ATAGTCGGCC AGAAAGAGGC CGAAAAGTAG CTTTGACTGA TATTCCAACG CCGGCGAACG CAACTCCAAG TCATGTTTGA 
Length1620
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18494813.. 18496870
Download Sequence
A.thaliana
AGI-codeAT5G60780.1
Descriptionnitrate transporter 2.3
TAIR curator summarymember of High affinity nitrate transporter family
Alias[ATNRT2.3][NRT2.3][ARABIDOPSIS THALIANA NITRATE TRANSPORTER 2.3][nitrate transporter 2.3]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg334098 nitrate transporter 2:1
7.2111 Ahg474543
7.34847 Ahg313119 RNA-binding (RRM/RBD/RNP motifs) family protein
14.5602 Ahg471290 xyloglucan endotransglucosylase/hydrolase 8
15.8745 Ahg470362 FASCICLIN-like arabinoogalactan 9
24.3721 Ahg486344 phy rapidly regulated 2
27.4591 Ahg496670 beta-D-xylosidase 4
28.6356 Ahg492514 WRKY family transcription factor
39.0896 Ahg933489 TRICHOME BIREFRINGENCE-LIKE 45
39.1918 Ahg483654 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression