Detail



ID : Ahg333080

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|333080|fgenesh1_pm.C_scaffold_9000108
Sequence
ATGATGAAGG AAGACGGCAG AGGAAGGAAT CCGCCGTCGC GGCATCTTTG GGTTGGTAAC CTTCCTCATG GGATACCGGA ACGAGAATTA GCCGACCGGT TCTTAAGGTT TGGTGAATTG GAGAGCTTAG CATTTCAGCC TGGACGAAGC TATGCATTCG TTAATTTTAA ACACGACGAA GATGCGTTTG CGGCGATCGA GTCGCTTCAA GGCTTCCCAC TCTCTGGAAA CCCACTTAGG ATCGAGTTTG CTAAGGCGGA AAAGTCATCA ACTGGATCAC GCACAGAAGA TATATTTCGC CATGATGAAC AGCGGTCTGC AGCAAGAGGG TCTTCTTTTG TCCAAAAGGA CTCCAGGATG CTTTATGAGA GCCCAGACAC ATATAGCAAA TCAAAAATGA ATGATAGAAA TGCAGAACCC AGTGAGGTAC TATATATAGG GTTTCCGGCT TCGTTGAAAG TCGATGATGC GCTCTTGAGG AACGTCTTTT CTTCGTTTGG AGAAATAACC AAGGTCACGG TATTCCCCGG TCGCAGTTAT GCATTTGTTC AATTCCGAAA TCTGATGGCA GCTTGTAAGG CGAAAGAAAC TCTTCAGGGA AAGTTGTTTG GCAATCCTCG AGTGCATATT TGTTTTGCAA AGAGTGAACC TTCCTCATCT AGCAGTGGAA GGGGTCCATC GAGTAGATCA CTCTCTCCGC CTTACAGATC TGTTGATCGA CTGGGATCTT CAGAAGGTTA TCTTCAGGAT AGAAATTATG GAAGCATCAG CAGAATTCCC AGTGTGAGGG AACCACATTA CATAGCAGAT AGGGATTTGG AAGATTCTGA AGATTACATG TTTGACAGGA AACGAGTCTC AAGGAACGAT GGAGGTCCTG CATATGGAAG GTCGAGATCT ACACATAGAT TTCCTCAGGA TATGCATGAA TATCATGGTA GTCCTAGGGA AATGGGTTCG GCATTCCGTG ATGATCCTCA CAGATTCCAG TCAAGGAGTT CAGTGTATGA AGAGCCATGG GATTTACCCG AAGATGACTA CTACTACCAG GAAACCAAGA GACTGAAGAC AAGATCCGTG CAGCCTGAGA GGCAGCTCCC AGGGCATCAG CTATCTGGTA TAGAGCAAGA AAGACGCCCT TTTTCAAGGG CATCTGCTGA TTTTTCCCCA AAAGATGCAT TCGAGCGGAA CTATGAGGCT GGACAGCTAC GATACAAGCA AACAGTTGAG CAGCCGTTAA ACCTGGCTAT AAGGAACGGG GACAAGAGTA GCTTACGAGA ACCACATGAC GAGTTAATGG GAGGTTATGC TCTGCCATCA ATCGTCCCTG AAAGAAAAAG GCACACCCCT GAACTGAATC GACCATCACT AAAGGACTGG AACTGGGAAG GGACTATTGC AAAGGGAGGG AATCCCATTT GTCGAGCTAA ATGCTTTCCT GTGGGCAAAG TGATGGACAT GATACTGCCT GAGTATGTAG ATTGCATGGC AAGAACTGGT TTAGACATGC TGGCCAAGCA TTACTACCAA TCATCTAAAG CATGGGTGGT TTTCTTTGTT CCTGGAAGTG ATGCTGATAT TGTGTTTTAT AATGAGTTTA TGCATTATCT GGAGGAGAAG CAACGTGCAG CTGTTTCTAA ATTGGATGAC ACAACAACAT TGTTCCTCGT GCCTCCATCT GATTTCTCCG AGAAAGTACT TAAAGTTCCT GGGAAACTTA GCATCTCTGG AGTTATTCTA CGTTTAGAAT GTGGTGGTTC TGGATCTGGG CCTGTCCAAC AGCAAGGTGA GAGAAAAGAT TCAGACTTGT TAACCTATTA TGGTGAAACA TCATATGCAG AAGCTAGCGG AGCTTTTCCT GATGTGGGAA ACCCACGTAT TCCGGGTCCA ACAGCATTTT TGCTTAGTGC GGGTCGTGAC GGTCAAAGTG CATCTATGGA TCCATACATT GAGAGCAAGC ATGATCAGTT GAGTCACAGG TATTCTGGAT CGGACTGGCC GCCTCGTGAT ACCAACCCCA GAAGTTCACA GATGCAACCC TTCATAGATA AAAATACTGT TCAAGAACAT AGCGGGTTTG TTCCTGGGAA GCAGCAAAAT GCAGATCTTA GTCGTTATCA TGATACGGAT ACTCCAGCCC CATCGGGGTT TCAGCCTGAA CAGCTTACAC ATTTAGCTTC CTCGCTGCCC AGACAGCAAA AGCATGTACA GAACACTCCA AATCAGCCTG AGAGATATGC ACCAGAAGGC CGAGCAAGTT TCAGCCATTT GCAACACGCG CAGACACCAA GCATACCTCA ATTAGTATCT CCAGGAAATC AAAATGTACA GATACAAGGT AGCAATAGCC AACAAGAAGA AGAAACAGAG GCTAATCCAC AGAAGCGTCT CCAAGCAACA TTGCAGCTAG CAGCTGCACT TCTCCAGCAG ATTCAACAAG CTAAACCGAG TTAA 
Length2454
Protein Sequence
Protein Residue
Map Locationscaffold_9: 1682989.. 1688266
Download Sequence
A.thaliana
AGI-codeAT4G12640.1
DescriptionRNA recognition motif (RRM)-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.83095 Ahg482300 C-terminal domain phosphatase-like 3
13.3041 Ahg477703 endoribonucleases
13.7113 Ahg482372 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
13.9642 Ahg478298 RING/U-box superfamily protein
20.2485 Ahg487067 ubiquitin-protein ligase 4
21.7945 Ahg938852 DNAse I-like superfamily protein
23.2164 Ahg480532
25.4558 Ahg473764 Sphingomyelin synthetase family protein
26.7208 Ahg349229 RING/U-box superfamily protein
28.1425 Ahg495622 ENHANCED DOWNY MILDEW 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression