| Annotation |
|---|
| Description | jgi|Araly1|333664|fgenesh1_pg.C_scaffold_1000229 |
| Sequence |
ATGATGAAGA AGGGGAAAGG GAAGAACAGT GGCTTGTTAC CGAATTCCTT TAAGATTATA TCTTCTTGCC TCAAAACTGT ATCGGCTAAC GCCACCAACG TTGCGTCGTC GGTTCGTTCC GCTGGAGCCT CCGTCGCTGC TTCAATTTCC GCTGCTGAAG ATGATAAAGA TCAGGTGACA TGGGCTGGCT TTGGCATTCT TGAACTGAGT CAACATGTCA CCAGACATGT TCTCTTACTC GGTTATCAGA ATGGCTTTCA AGTCTTTGAT GTTGAGGATG CCTCTAATTT TAATGAACTG GTCTCTAAAC GAGGTGGCCC AGTTTCATTC TTACAGATGC AGCCATTACC TGCAAGGTCT GGTGATCATG AGGGTTTTGG GAACTCACAT CCTCTTTTGC TGGTTGTTGC TGGGGATGAC ACAAGCGGCA CTGGTTTGGG TCACAGTTTT TCCCAGAATG GTTCATTAGC AAGAGATGGT AAATCAGACT TTAAAGCCGG GGATGCCATC AATTATCCTA CCACTGTTCG CTTTTACTCC CTTAGGTCCC ACAGTTATGT ATATGTCCTG AGATTTCGGT CATCTGTTTG CATGATTAGA TGCAGCTCCC GAGTAGTCGC TGTTGGCCTT GCGAATCAAA TATATTGCTG TGACGCACTT ACTCTGGAAA ATAAGTTCAG TGTTCTAACT TATCCTGTTC CCCAGCCAGT GAGACAAGGG ACAACCAGGG TTAATGTTGG CTATGGTCCG ATGGCTGTAG GTCCAAGGTG GCTTGCATAT GCGTCCAAAA GTTCCATGAC CATGAAAACA GGGCGCCTAA GCCCACAGAC TTTTACTTCT TCACCCAGTC TCAGCCCAAG TTCATCATCA GGTGGAAGTA GTTTTATGGC CCGTTATGCC ATGGAGTCCA GCAAGCAGTT AGCCAATGGA TTAATCAACC TGGGGGACAT GGGATACAAA ACATTGTCAA AATACTGTCA AGATATGCTC CCTGATGGAT CTACTTCTCC AGCATCACCA AATTCAATCT GGAAAGTTGG TGGGGTTACT GGATCAGATG CAGAGAATGC TGGAATGGTT GCTGTTAAAG ATCTTGTTTC TGGAGCTTTA GTATCACAGT TCAAGGCTCA TACGAGTCCT ATCTCAGCAC TTTGTTTTGA TCCTAGTGGA ACTCTATTGG TTACTGCTTC AGTGTGTGGG AACAATATCA ATGTCTTTCA GATCATGCCA TCTCGTTCAC ATAGTGCACC TGGTGACCTA AGTTATGAGT GGGAATCTTC TCATATGCAT CTTTTCAAAC TGCATAGAGG AATCACTTCA GCTATTGTCC AGGACATTTG CTTTAGTCAG CAGAGTCAGT GGGTGGCTAT TATTTCATCC AAGGGTACTT GCCATATTTT CGTTTTAAAC TCGTCTGGTA GCGACGCTGC GATTCAACCT TGTGAGGGTG AGGAGCCTAC CCGACTTCCA GCTTCATCCT TGCCATGGTT GTTTACTCAA TCGTTGTCAA ATAATCAGCA GTCTTTATCG CCACCACCAG CTGTTGCCCT TTCTGTTGTA AGCAGAATAA AGTATAGCAG TTTTGGGTGG CTTAACACAG TAAGCAATGC TGCTACTGCT GCAACTGGAA AAGTTTTTGT ACCATCGGGT GCCGTGGCTG CTGTTTTTCA TAAATCCGTC ACTCATGACC ATCAGCTGAA CTCCCGGACT AACGCGTTGG AGCATATCTT AGTCTATACT CCATCAGGCC ATGTGGTGCA GCATGAACTT CTGCCATCAG TTTGCACAGA ATCACCTGAA AATGGTTCGA CAGTGCAAAG AACATCACAT GTTCAAGTTC AGGAGGATGA CTTGAGGGTC AAAGTTGAGC CTATTCAGTG GTGGGATGTA TGTAGAAGGT CTGACTGGTT GGAGACTGAG GAACGACTTC CCAAAAATAT CACTGAAAAG CAATATGAAT TAGAGACAGT GTCAAATAAC TTGACAAGCC ATGAGGTTTC ATGTCTTTCC CTTGACATCA ACAGCCATTT TGGTGAAGAT AAGTATTTGA AAAGTTGTTC TGAGAAGCCC CCTGAAAGAT CACATTGCTA TCTTTCTAAC TTTGAGGTAA AGATAACCTC GGGGATGCTA CCAGTGTGGC AAAATTCAAA GATTTCTTTT CATGTTATGG ATTCTCCAAG AGATAGTAGT TCAACTGGTG GAGAGTTTGA GATAGAAAAG GTTCCGGCTC ATGAACTTGA AATAAAACAG AAAAAGCTGC TGCCAGTTTT TGACCATTTC CACAGCACCA AAGCAACATT GGAAGACAGG TTTTCCATGA AATGTTATCA CACCTCCGCA TCGGGATCTC ATCACGTTAA TGGAAAAATA TGCCAAGATA TTATCAATTG TCACTCTAAG CCAGGATCAG TCGAGTCCGC CGAAAGTTCT GAAGAGGGTT CAACGAAACA GATGGAGAAT CTCTGTGATT CGGATCATAT GAACAACTCT TTCAAGTCTT CTTTAGCCCT TTACCCAACA GTAAATGGGA TCTACAAGGA AATAGAGAAG AACAACACAA ATGGGTGGAT TGAGAAACCC GTAACAGCCA AACTCTCTAC ACTCAAAGAA ACCAGGATCA CAAATGGCTT TACCACACCA CCGATTCACA CCGATAGTAC TGTCAACGAG CAGATGCTCT CTACAGGAAA ACCTCCTATG GGCTTTGGTT TTGCTTTGCA TGAGGAGCAC TGTAAAGCAG TAGCAGATCC AAAAGAAGAA CACCTGAAAA AGAAGTTAGA TGAAGTTACT AATGGTCATC ATCTAAACGT CAATAACATA GAGAAACTAC AAGGAGATGA AATGGTATAT GGTATGGTCT CCTTTGTAGG AGATTAA |
| Length | 2877 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 945833.. 950277 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G03380.1 |
| Description | homolog of yeast autophagy 18 (ATG18) G |
| TAIR curator summary | |
| Alias | [ATATG18G][ATG18G][homolog of yeast autophagy 18 (ATG18) G] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.74456 |
Ahg495757 | IAA-leucine resistant (ILR)-like 1 |
| 6.55744 |
Ahg480735 | tubby like protein 2 |
| 7.2111 |
Ahg474651 | ubiquitin-protein ligase 1 |
| 12.9615 |
Ahg921319 | T-complex protein 11 |
| 13.5277 |
Ahg473945 | calcium-dependent lipid-binding family protein |
| 13.6382 |
Ahg895977 | RNA polymerase II transcription mediators |
| 14.2478 |
Ahg489168 | Zinc finger, C3HC4 type (RING finger) family protein |
| 14.3178 |
Ahg331828 | |
| 15.1658 |
Ahg472815 | phytochrome and flowering time regulatory protein (PFT1) |
| 17.7482 |
Ahg482460 | cationic amino acid transporter 5 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|