| Annotation |
|---|
| Description | jgi|Araly1|472815|fgenesh2_kg.1__2769__AT1G25540.1 |
| Sequence |
ATTCGGAGCC TCGAAACCAA ATTTTGTCAA CCGGAGAAGA AGGAAAATTC CAAGGCGAGA GACTGAATTT GCGTTTGATT CACGTCACAA CGCTCAGAGA CTATGTCGTC GGAGGTGAAA CAGCTGATCG TCGTTGCTGA AGGCACCGCC GCTTTGGGTC CTTATTGGCA AACCATCGTC TCCGACTATC TCGAGAAAAT CATCAGGTCT TTCTGTGGCA GTGACTTAAA TGGAGAGAGG AACCCTGTTT CTACTGTTGA GCTATCACTG GTGATCTTCA ATTCTCATGG TTCATACTGT GCTTGCTTGG TACAACGGAG TGGCTGGACC AGAGATGTTG ATATTTTCTT GCATTGGCTT TCGTCCATAC AATTTGGTGG TGGTGGTTTC AATGAGGTTG CCACAGCTGA AGGGCTTGCC GAAGCATTGA TGATGTTTTC TCCTCCTTCA GGCCAAGCTC AACCAAGTAA CGATCTGAAA AGACACTGTA TCCTAATCAC AGCCAGCAAC CCTCACACAT TGCCAACACC TGTATTTCGC CCACGATTGC AAAGTATGGA ACGGAATGAA AATGGTGATG CGCAAGCTGA AAGTCGATTA TCAGATGCTG AGACAGTGGC TTCATATTTT GCTAAGTGTT CTGCTTCTTT GTCTGTTGTG TGTCCAAAGC AGCTTCCAAA GATTAGAGCA CTATACAATG CGGGAAAGCT CAATCCACAA AGTGCTGACT TGTCGATTGA CACGGCTAAG AACACATTCT ATCTTGTCCT AATCTCAGAG AATTTTGTGG AGGCACGTGC TGCCTTAAGT CATTCTGCTA CAAATTTGCC ACAGACCCAG AGCCCTGTGA AAGTGGACCG GGCCACTGTT GCTCCATCTC TTCCAGTCAC TGGGCAACCT CCAGCTCCTG TGACATCAGC CAATGGACCT ATTCAGAATC GGCAACCAGT TTCTGTTGGA CCAGTGCCAA CTGCTACTGT GAAAGTTGAG CCTAGCACCG TAACTTCTAT GGCACCAGTT CCTAATTTTC CCCATATCCC GTCTGTAGCT CGGCCTGCTA CACAACCAAT TCCTTCAATT CAAACATCTT CAGCATCACC AGTTTCTCAA GATATGGTCA CCAACGCTGA GAATGCACCA GATATTAAGC CTGTGGTGGT GGGTGGAATG ACGCCACCAT TGCGTACTGG TCCTCCTGGT GGAGCCAATG TAAATCTGCT TAATAATCTT TCTCAAGTTC GACAAGTCAT GAGCTCTGCA GCTCTGGCAG GTGCAGCCTC ATCGGCTGGG CAAAGTGCGG TTGCAATGCA TATGTCAAAT ATGATATCAA CAGGAATGGC TACATCTTTG CCTCCTTCAC AAACTGTGTT TTCAACTGGA CAGCAGGGAA TTACTTCAAT GGCTGGTTCA GGTGCACTAA TGGGATCTGC ACAAACGGGA CAAAGCCCGG GTCCTAATAA TGCCTTTAGT CCTCAAACAA CGTCAAATGT TGCTTCAAAC CTTGGTGTTT CACAACCAAT GCAAGGGATG AACCAAGGAA GTCATTCTGG AGCAATGATG CAAGGTGGCA TTTCCATGAA CCAAAACATT ATGAGTGGTC TCGGTCAAGG AAATGTCTCC TCTGGAACTG GTGGAATGAT GCCTACTCCA GGAGTTGGCC AACAAGCGCA ATCAGGAATA CAACAACTTG GTGGAAGTAA CAGCTCAGCT CCTAATATGC AGTTGTCACA GCCCTCATCG GGGGCTCTAC AGACTTCACA ATCCAAATAT GTAAAAGTCT GGGAGGGAAA TTTATCTGGG CAAAGGCAAG GGCAGCCTGT TCTTATCACC AGACTTGAGG GTTACCGAAG TGCTTCTGCC TCTGATTCGT TGGCAGCAAA TTGGCCACCA ACTATGCAGA TTGTTCGTCT CATTTCCCAG GATCATATGA ATAACAAGCA ATATGTTGGC AAAGCTGACT TCCTTGTGTT TCGGGCCATG AGTCAACATG GGTTCTTAGG ACAACTTCAG GATAAAAAGC TTTGTGCAGT CATCCAGTTG CCATCGCAGA CGCTTCTTCT CTCTGTCTCT GACAAGGCTT GCCGCTTGAT TGGAATGCTT TTCCCAGGGG ATATGGTTGT GTTTAAACCA CAAATTCCAA ATCCGCAACA GCAGCAGCAA CAACAGCTCC AACAGCAGCA CCAGCAACAA CAGCAGATCC AGCAGCAGCA GCAACAACAA CAACACCTCC AACAGCAACA GATGCCACAA CTCCAGCAGC AACAACAACA ACAACACCAG CAGCAACAGA TGCCACAACT CCAGCAGCAG CAGCAGCATC AGTTGTCACA GCTCCAACAT CATCAGCAGC AGCAACAACA ACAACAGCAG CAACAGCAGC AGCATCAATT GACACAGCTT CAACACCACC ATCAGCAGCA GCAGACGTCG CCGCTGAATC AGATGCAGCA GCAGACCTCG CCACTGAATC AGATGCAGCA GCAACAGCAG CCTCAACAGA TGGTAATGGG TGGTCAAGCT TTTGCTCAAG CCGCGGGAAG ATCACAACAA GGTGGTGGAG GAGGACAGCC TAACATGCCG GGAGCTGGCT TCATGGGATA AATAAAGATA TCATCTTCAG TGCTAATTAA TTAGTTAGAT TCATCATAAC TTAAAATTCT TTCTTTCTTC TTTGGTCAAC TCGATCGTCG CCATGGTTTT AGACTCTGTT TAGTTCTCCC TCCTCTCTCT GTTCTTTTGA GCCTGAAAAT GGCATGTCCT ATTATGGGTC TGACCATTTA GCTGCGGCAC CAAACTATTT TGTTATGTTC TTTAGATAAA GACAAAAACG TGGATGATTT CTATTTTGTT GTTGTTTCTA CAGGCTGATA AGAACTTTTT ATCTAGCTTT TTATTTGATT GACAAGGAAA TAAAGGATCA AAACCATTTC AT |
| Length | 2932 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 10968781.. 10971591 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G25540.1 |
| Description | phytochrome and flowering time regulatory protein (PFT1) |
| TAIR curator summary | Encodes a nuclear protein that acts in a phyB pathway (but downstream of phyB) and induces flowering in response to suboptimal light conditions. Mutants are hypo-responsive to far-red and hyper-responsive to red light and flower late under long day conditions. Also shown to be a Mediator subunit regulating jasmonate-dependent defense. |
| Alias | [MED25][PFT1][mediator 25][PHYTOCHROME AND FLOWERING TIME 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg943470 | cullin 1 |
| 2.64575 |
Ahg919825 | protein phosphatase 2A-2 |
| 4.89898 |
Ahg494999 | WD40/YVTN repeat-like-containing domain;Bromodomain |
| 5.09902 |
Ahg947531 | |
| 5.47723 |
Ahg496915 | mitogen-activated protein kinase kinase kinase 5 |
| 6.32456 |
Ahg470748 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| 6.48074 |
Ahg496212 | PDI-like 1-4 |
| 9.05539 |
Ahg485448 | HOPZ-ACTIVATED RESISTANCE 1 |
| 9.94987 |
Ahg934591 | SCAR homolog 2 |
| 13.0384 |
Ahg924940 | WAPL (Wings apart-like protein regulation of heterochromatin) protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|