Detail



ID : Ahg338432

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|338432|fgenesh1_pg.C_scaffold_2000531
Sequence
ATGATACATT TGGCTGGATT TACGTGTTGT TTAGGCGGCA TCGCTCTTTA TCTTCTCAGC CGGAACACAG GCGGAGTTGT CAAATCAATC ACTAGGGTTA ACCACCTCAA GGATTTGGAA CAATTGGTAG AGAGCAAGGT GTTTCCTTTG ATCATAGCAG TATCAGGAAT TGTCGGCTCT GAGACACCTA TCAAGTGTGA GCATAGTGAC ATACTCGGTG TTTTTCTCAA GAAAACGGCA GAACAACAGG TTTTGAGTCG TAATTGGAGG TTCTCGTGGG TTCGAAAGAG TACATTGATG CAGCCGATGA CTAAGGAAGT CCCGTGGTTT CTGGACGATG GGACAGGTCG TGTGAATGTA GCGGTATCTC AAGGTGAAAT AGGCTTGGCG TTGACGGTTG GAAGTGATGT ATTTGAAAAG GCAGAGCCGG TTTCGCTTGT TCAAGGAACC TTGGATTATC TTAAAGGCCT CAAGATACTT GGAGTAAGAC GCGTTGAGCA TGTTGTCCCA ATTGGTACAC CGCTTACAAT TGTTGGTGAG GCTGTTAAGG ATGGCATGGG GAATGTCAGG ATTCAAAAAC CTGAGCAAGG ACCTTTCTAC GTGTCTTATG TACCGCTCGA TCAACTCATC TCTAAATTGG GAGAATGGTC AAGGAGGTTC AAGTATGCCT CCATGGGCTT AACTGTTCTT GGTGTGATTC TTCTTTCAAA GCCTGTGATT AAATATATTC TAAAGAAAAT TGAAGATACT CTAGAGAGAA GGCGGCGACA ATTGTTACAG AAAAGAGTTG TTGATGTACC TGATCTCTGC GTGATCTGCC ATGACCAGAA GTATAACACC GCTTTTGTTC AGTGTGGTCA TATGTGTTGC TGCTTAACAT GCTCCTTGCG ATTGACGACC TGTCCTCTTT GCCGGGAACG AATACAACTA GTTTTGAAGA TTTACCGCCA TTGA 
Length954
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3574779.. 3576496
Download Sequence
A.thaliana
AGI-codeAT1G59560.1
DescriptionE3 Ubiquitin ligase family protein
TAIR curator summary
Alias[DAL2][SPL1][ZCF61][DIAP1-like protein 2][SP1-like 1]
Gene coexpression
MR
MR Locus Description
21.0713 Ahg479088 HPT phosphotransmitter 4
26.2679 Ahg481085 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
57.3934 Ahg926922 conserved peptide upstream open reading frame 5
58.5064 Ahg484766 chromatin remodeling 38
62.546 Ahg934404 conserved peptide upstream open reading frame 52
72.4362 Ahg474716 dehydrin family protein
77.0454 Ahg491451 ArfGap/RecO-like zinc finger domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression