Detail


ID : Ahg926922

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926922|scaffold_202483.1
Sequence
TCTGTGTGTG TGTTTTTAAA TATGAATAAT AAAACTGAAA TGGGATCGTC GACAAGTGGT AATTGCTCGT CGGTTTCAAC CACCGGTTTA GCTAACTCCG GTTCGGAATC TGATCTCCGG CAACGAGATC TAATCGACGA GCGGAAGCGA AAGCGGAAAC AGTCGAACAG AGAATCTGCG AGGAGGTCGA GGATGAGGAA GCAGAAGCAT TTGGATGATC TCACTGCTCA GGTGACACAT CTACGTAAAG AAAACGCTCA GATCGTCGCC GGAATCGCCG TCACGACGCA GCACTACGTC ACAATCGAGA CGGAAAACGA CATTCTCAGA GCTCAGGTTC TTGAGCTCAA CCACCGTCTC CAATCTCTTA ACGAGATCGT CGATTTCGTG GAATCATCGT CTTCAGGATT CGGTATGGAG ACCGGTCAAG GAATGATCGA CGGTGGATTT TACGACGGAG TGATGAATCC TATGAATTTA GGGTTTTATA ATCAACCAAT CATGGCTTCT GCTTCTACTG CTGGTGATGT TTTCAACTGT TAGAAAATTT CACATCATTA TCA
Length563
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15703372.. 15703930
Download Sequence
A.thaliana
AGI-codeAT1G75388.1
Descriptionconserved peptide upstream open reading frame 5
TAIR curator summaryUpstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF5 represents a conserved upstream opening reading frame relative to major ORF AT1G75390.1
Alias[CPuORF5][conserved peptide upstream open reading frame 5]
Gene coexpression
MR
MR Locus Description
22.0227 Ahg934404 conserved peptide upstream open reading frame 52
22.4944 Ahg479088 HPT phosphotransmitter 4
27.9285 Ahg496559 Leucine-rich repeat protein kinase family protein
33.2566 Ahg493510 Rapid alkalinization factor (RALF) family protein
34.8138 Ahg934426 sulfate transporter 3;2
42.4617 Ahg492401 phosphoglucan, water dikinase
50.6162 Ahg490418 GRAM domain family protein
57.3934 Ahg338432 E3 Ubiquitin ligase family protein
60.7947 Ahg345529
65.1153 Ahg928998 zinc transporter 1 precursor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression