| Annotation |
|---|
| Description | jgi|Araly1|343571|fgenesh1_pg.C_scaffold_3003334 |
| Sequence |
ATGGAGTGGG ATAGTGATTC CGATCTCAGC GGGGGAGATG AAGTGGCGGA GGATGGATGG TTCGGCGGAG ATAACGGAGC GATTCCGTTT CCGGTAGGTA GTCTTCCTGG AACGGCGCCG TGTGGTTTTG TGGTCAGCGA TGCTCTTGAA CCTGATAACC CTATCATTTA TGTTAACACT GTTTTTGAGA TTGTTACTGG TTATCGAGCT GAGGAAGTTA TTGGTCGAAA TTGCCGGTTC TTACAATGTA GAGGGCCATT TGCTAAAAGA AGGCATCCAA ATGTAGATTC TACAATTGTG ACGAAGATGC GGCAATGTCT AGAAAATGGC ATCGAGTTTC AAGGCGAGTT GCTCAACTTT CGGAAAGATG GATCTCCCTT GATGAACAAG CTGCGTCTAG TCCCTATCCG TGAAGAAGAC GAAATCACTC ATTTCATAGG CGTTCTTTTA TTCACAGATG CAAAAATTGA TCTTGGCCCA TCTCCTGATT TATCTGCAAA AGAAATTCCA AGAATATCTC GCTCATTTAC TTCTGCTTTA CCAATCGGAG AGCGTAATGT TTCTCGTGGA CTTTGTGGGA TATTCGAACT GAGTGATGAG GTCATAGCTA TCAAGATATT GTCACAGTTG ACTCCTGGTG ATATTGCATC GGTTGGTTGT GTATGTCGGC GGCTCAATGA GTTGACAAAG AATGATGATG TATGGAGAAT GGTCTGTCAA AACACATGGG GTACAGAGGC AACACGTGTT CTTGAGAGTG TTCCTGGTGC AAAGAGGATC GGTTGGGTGC GACTGGCCCG AGAGTTTACC ACACACGAAG CAACAGCATG GAGGAAGTTT TCGGTTGGAG GTACTGTTGA GCCTTCCCGG TGTAATTTCA GTGCATGTGC AGTTGGGAAC AGGATTGTTA TCTTTGGCGG GGAAGGTGTA AATATGCAGC CGATGAATGA TACATTTGTG TTGGACCTTG GCTCGAGTAG CCCCGAGTGG AAATCCGTTC TGGTCAGCTC TCCTCCACCG GGGCGCTGGG GTCACACACT TTCTTGTGTC AATGGATCCC GTTTAGTAGT GTTTGGAGGT TACGGGAGCC ACGGATTACT CAACGATGTG TTCTTATTAG ACCTTGATGC AGACCCGCCA AGCTGGAGAG AAGTATCCGG ATTGGCTCCT CCAATACCAA GATCATGGCA CAGTTCGTGC ACACTTGATG GCACTAAGCT GATTGTATCA GGTGGTTGTG CTGATTCAGG AGCTCTACTC AGCGATACAT TCCTGCTTGA CCTTTCGATG GATATACCGA CTTGGAGGGA GATACCAGTT CCATGGACTC CTCCATCTCG CCTCGGACAT ACACTAACCG TCTATGGTGA CCGCAAGATC CTCATGTTTG GCGGTCTTGC CAAAAGCGGT TCTCTGAGAT TCCGCTCTAA CGATGTATAC ACGATGGATC TTAGCGAGGA TGAGCCAAGT TGGAGACCCG TGATTGGGTA TGGATCTAGC CTCCCGGGAG GCATGGCAGC TCCGCCATCA AGGCTGGATC ATGTGGCAAT CAGCCTTCCT GGTGGTAGAA TCTTGATCTT TGGTGGTTCA GTTGCAGGGC TTGACTCAGC ATCTCAGCTT TATCTTCTTG ATCCAACAGA GGAGAAACCA GCATGGAGAA TACTGAATGT TCAGGGAGGT CCGCCGAGGT TTGCGTGGGG ACACACCACT TGTGTAGTCG GAGGAACTCG GTTGGTCGTC TTAGGTGGTC AAACCGGTGA AGAGTGGATG CTAAATGAAG CTCATGAACT ATTATTAGCA ACGTCTACTA CTGCAAGCAC TTGA |
| Length | 1824 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 22257540.. 22260059 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G18915.2 |
| Description | LOV KELCH protein 2 |
| TAIR curator summary | encodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins. |
| Alias | [ADO2][LKP2][ADAGIO 2][LOV KELCH protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.69536 |
Ahg949816 | dentin sialophosphoprotein-related |
| 12.7279 |
Ahg471107 | sucrose transporter 4 |
| 15.0665 |
Ahg346222 | methylenetetrahydrofolate reductase 2 |
| 15.748 |
Ahg496554 | ENTH/VHS/GAT family protein |
| 25.3377 |
Ahg329104 | dentin sialophosphoprotein-related |
| 28 |
Ahg322516 | cleavage and polyadenylation specificity factor 73 kDa subunit-II |
| 38.4187 |
Ahg477634 | O-fucosyltransferase family protein |
| 42.9535 |
Ahg950020 | Tyrosine transaminase family protein |
| 43.6921 |
Ahg900511 | |
| 46.669 |
Ahg944766 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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