Detail


ID : Ahg346169

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|346169|fgenesh1_pg.C_scaffold_4002511
Sequence
ATGGCGAATT ACGCCAAATC CAGCACCAGA AAAGACACAA TTACTCTTTT GCTCACAACT CTCCTTGTCT TGATCCTGAC CGTTTCCAAA CCAGTAACTT CCCAAAACTG TGGCTGTGCC TCTGACTTCT GCTGCAGCCA ATGGGGTTAC TGTGGTCAGA CAGATGATTA CTGCGGCGAA GGCTGCCGTG AGGGCCCTTG TCAACGTAGT AGTGAGACCA GCGGCGGCGA AAACAGTGGC GGCGGCGGAG ATGCTGTTTC GCTTGAAGGA ACGGTGACAC CTGAGTTCTT TAACTCTATA TTAAACCAAG CAAGAGGTGA TTGTGCAGGT AAAGGATTCT ACTCTCACAA TGCCTTTATG GCCGCAGCTA ATTCGTACCA GAGCTTCGGT GCTTCCATCT CCAAACGCGA GATCGCTGCG TTCTTCGCTC ACGTCACCCA TGAAACAGAA TTCATGTGCT ACATCGAGGA AATTGATGGA CCAGCCAAAG CCGAGAACTA CTGTGAGAAA GACAACACAG ATTTCCCATG TGCACAAGGA AAGGCCTATT ATGGCCGTGG TCCAATCCAG CTCTCTTGGA ACTACAACTA CGGTCTTTGT GGCAGAGACC TGAACGAGAA CTTATTGGCC TCACCAGAGA AAGTGGCTCA AGATCCAGTT CTTGCCTTCA AGACTGCTTT CTGGTTCTGG ACCACTAATG TTCGTGGGAA ATTTAATCAG GGTTTTGGCG CGACGATCAG AGCTATAAAT GGTATGGAGT GTAGCGGAAG AGATCCTGCA ACTGTCGCCA AAAGGATTGA GTATTACCGA GACTATTGTG GCAAACTTGG GGTCGAACCT GGCGACAACC TCTCTTGTTA A
Length861
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20242589.. 20243617
Download Sequence
A.thaliana
AGI-codeAT2G43570.1
Descriptionchitinase, putative
TAIR curator summary
Alias[CHI]["chitinase, putative"]
Gene coexpression
MR
MR Locus Description
1 Ahg488726 Curculin-like (mannose-binding) lectin family protein
2 Ahg943574 Chitinase family protein
2.23607 Ahg921441
2.82843 Ahg482113 Leucine-rich repeat protein kinase family protein
3.74166 Ahg350245 RING/U-box superfamily protein
4.69042 Ahg942007 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
4.89898 Ahg925639
6.9282 Ahg313733 VACUOLAR SORTING RECEPTOR 6
8.30662 Ahg476608 ADC synthase superfamily protein
8.94427 Ahg319814 plant natriuretic peptide A
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression