Detail



ID : Ahg348938

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|348938|fgenesh1_pg.C_scaffold_5002330
Sequence
ATGGCTATTC TTCTGCTCCA AATCAACCCA ATTATAGTTA TGATTCTGAT ACACGATCAT CGGGTTGGCG AGTTCCTGCT TTCTCTTCGC GGAATGCTTG GTCCAGGAGT AATTCAAGAT TTAGTACCAC CATCACACAC TCGGCATCGG ATTCCAATCC GTAACAGCAA CAACCTACGA AGACAGCACC TCGAGGCACT AAGACAAGCC GTTCACAACG AACCCGCTAG ACCCGAGAGC AGCTCAAGAT CATCATCACA AACCAATGAA GAAGACGAAA TCCTCAAACA TCTAACAAAA GAGACATATA ACCCAGTCCC AAAAAGCACC CTTCTCAGAA GCCTGAGCTT ATACTACAGA AACAAAAACC CGGGAAGCGA AAACTCAAGA AACACTCAAG ATCTCTCTGG TGAAGAAGAC GACAAGAGAT GCTCCGTGTG TTTAGAAGAC TTCGAGCCCA AGGAAACAGT GATGCTCACT CCTTGCAAAC ACATGTTTCA TGAGGAATGT ATAATTCCAT GGTTAAAGAC CAAAGGACAG TGTCCTGTCT GTAGATTCGT CATACTCAAG CCGGCAAAAC AAGATTCTTC TCTCACTAAT GGATCAAATC TTGCCAGAGA CATGACAATG GATGATCTCT TAACATTAGA GCTACTCTCT GTGGTAAGAG CAATGGAAGA AACTTTCCTT TTCGGTTATC CACGTCGCAT GTAG 
Length714
Protein Sequence
Protein Residue
Map Locationscaffold_5: 17959591.. 17960566
Download Sequence
A.thaliana
AGI-codeAT3G58720.2
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.9706 Ahg934404 conserved peptide upstream open reading frame 52
17.6635 Ahg929332 metallothionein 3
18.9737 Ahg326097 Auxin efflux carrier family protein
22.8473 Ahg486064 copper chaperone
23.6854 Ahg316075 Polyketide cyclase/dehydrase and lipid transport superfamily protein
28.3725 Ahg895882 TRAF-like family protein
29.5466 Ahg490488 TRAF-like family protein
30.133 Ahg492886 phloem protein 2-A1
32.8634 Ahg950116 HSP20-like chaperones superfamily protein
36.1663 Ahg479088 HPT phosphotransmitter 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression