Detail


ID : Ahg349540

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349540|fgenesh1_pg.C_scaffold_6000133
Sequence
ATGGCGAATC GAGGCGGCGA AAACGGGAAA TTGGAACGGA AGAAGACGAT GACGATGAAT TGGGCGGGGT TAGGCGAGGT TGAAGACGAC GACGATCATT TTTTCGATAG CTCTAATCGA ATCTCCACCG TTGTGCCTTT GGATTTAGCA TCATCTTCAG ATGAGGAAGA AGGTGAGTTT GATGATTGCC GGATCTCGTT TTCTTCTAAT GTATCGTCCT CCTCTCGCGC TGCTCCTGCG CCGGATATGT CGCCGGATTA TGATATTTGG ATGTCGGCGC CGGGATCTAT CACGGAGCGT CGTCGTCGGC TTCTTAATGG AATGGGACTT GAATCTAAGA AGACTATGCT TGGAGCTATC TCGATTCAAC GCGTGAGTGA ACCTGTGGCG GTGGCGGGTG TGTGCTCTGG TTCTCGCGTT GCGGAAGCGA AGGTGGAGGA GTCAGATCAC AATTCTCCGG TGAATCAACG AGTTCATCGA TCTTCATCGA TGTCGGTTTT GCTTGTACGG TCTAGATCTG ATTCTGATAT CGAAGCGTCT TCTGCTGAGA AAAAGAGGAA GGAAGAGATG TTAGGGAAAA CTTCGAAATC GCGATTAACT AGAACCGCGT CTGCGATTGG AGCTCCGTGT GCGAGAATTT GTCCCTACTT CACCCAAACG CAAGCCTCGC CGCCGGACGC ACCAAACGGT CATCAGTCTC AAGGCCAACG TAGTGGTGCG TTGCTCTCTT CGGTAGTTTC CAATACTCGT TTTAGTGCTT TTTTCTTGAT CAAGAATCTT GACACTGGGA AAGAGTTCAT TGTGAAGGAG TATGGTGAGA ATGGAATGTG GAATCGGCTT AGTGATTTGC AAACTGGTAA GCAATTGACA ATGGAAGAAT TTGAGAAAAG TGTTGGCTAT TCATCTGTTG TTAAGGATCT TATGAGACGA GAGAACGCGA ATTCGACGAT AGATTTTAGG AAATTCAATT CGTATGTGTC AAAGAGTTTG AGAGTAAGTA AGAAGAGAGG AGCTGCTTTG TTAAAGAACA TAAAGGACGT TGCTCATTCT ATGAGCTCTT CTAAGGTTTC AGAGAAAGAG AAGGATTCAA CTGGTAGTGG TACAAGTAGT CCAAAAGTAG TGGAGAAGAA CAATGAGCAG GCAAATCAAT GGGTGAAAGT GAGGCATTCA GGGAAGTCTC ATAAAGATTT AAGTGCTTTG CATATGTGTC AAGAGATTCA AGCTCATCAA GGAGGTATTT GGACTATGAA ATTTAGTCCA GATTCACATT TATTAGCAAG TGCAGGGGAG GATTGTGCAA TCCATGTGTG GGAGGTTCAA GAATGTGAAA TCATGTCAAT GAGTGAAGGG AGCTTGACAC CGATTCATCC TTCAATGTCT GGTTCCACGG ATAAATCGTC TACGGAAGGT GATGCTGCAG AAGTGTCACA GGATAAGAAG AAAAAAGGGA AAACTTCAAC GAGTAAAAAA GGAAACCAGA TACCAGATTA TGTCCACGCG CCTGAAACTG TGTTCTCATT GTCAGATAAA CCAATTTGCT CTTTCACTGG TCACTTGGAT GATGTTCTGG ACTTATCCTG GTCTCGGTCA CAGCTATTGC TTTCATCTTC CATGGACAAA ACTGTGCGGT TGTGGGATAT TGAAACTCAA AGTTGTCTAA AACTATTTGC CCACAATGAC TATGTTACTT GTGTACAATT CAATCCACTG GATGAAGATT ACTTCATCAG TGGCTCCCTT GATGCCAAGA TCCGTATATG GAACATATCA AACCGTCAAG TCGTTGAGTG GAATGATCTA AAGGAAATGG TTACCGCGGT TTGTTATACT CCTGATGGTC AGGCTGCATT TGTTGGTTCA ATTAATGGGA ATTGCCGGCT TTACAGTGCA GAGGATTGCA AGTTGGAACA AACAAACCAG ATAGATCTGC AAAACAAAAA GAAAGCTCAA GCTAAAAAGA TCACAGCCTT CCAGTTTTCT CCAATTAATC CATCAGAAGT GCTTGTAACT TCCGCTGATT CACGCATTCG GATTCTCGAC GGTACTGAAC TTGTTCAAAA ATTCAGAGGC TTCAAAAACA TTAACAGCCA AATGACAGCA TCTTACACAG TAGATGCTAA GCACATTGTC TGTGCAAGCG AAGACTCACA GGTTTACGTG TGGAAACACG AGGAGCCACG ACTAGGAATC ACCGGTAGAA AAACCGTCAC CATGTGTACT TCTTACGAAA CATTCCCGTG CAAAGATGTT TCAGTGGCAA TCCCGTGGAA CGGCGTTGTA AAAGGCGAAC CACCATCCAC ACAAACTCAG TCTAAAAGAA ACCCAAAGAA AACTTCAACT ACTACTACAA CTACCCCGGA AAACGCGACC ACGAGTAAAA AATCAGGCCT CCCACCATTA CCTAAGAAAA ACAATGACGG CACTGCAGAT GGAGCAACAG AACAACATCA AGATGATGAT CCCGCAACGC AGATTCCGCA AAACGAATCA GAGAACAACA CAGGAGAGTC ATTAAAGCAT GGGGATTCAC CTTCTATATC AATCTCCTCT CGGATTTCTT CTTGGTCTTG GTTTGATAGT AGTGGCAGTC ATGGAACACA TTCAGTTCAG CCAACAGCTT GGGGAATGGT GATCGTTACA GCCACGATCA AGGGCCAAAT CCGAGCTTAC CAAAATTTCG GATTGCCCCG CAGGGTTGGT CGTCAAGGCT CTCTGTTTTG A
Length2721
Protein Sequence
Protein Residue
Map Locationscaffold_6: 603893.. 607149
Download Sequence
A.thaliana
AGI-codeAT5G02430.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.93725 Ahg942960 VIRB2-interacting protein 2
9.11043 Ahg485004 heat shock protein 17.4
9.48683 Ahg476340 late embryogenesis abundant domain-containing protein / LEA domain-containing protein
13.4907 Ahg478284 ascorbate peroxidase 2
15.1987 Ahg900606 heat shock protein 90.1
20.7846 Ahg932241
21.4942 Ahg945273 heat shock protein 21
22.1811 Ahg323163
22.2711 Ahg495334 heat shock protein 90.1
26.7395 Ahg481866 HSP20-like chaperones superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression