Detail



ID : Ahg350155

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350155|fgenesh1_pg.C_scaffold_6000748
Sequence
ATGGCTCTGC ATTTGAGATC TTCTCCTTCA TTGAAATCGA CTTTCCTCAA CATTCTCAGA CAAAACCTGG GTTTCGGTTC TAGGAGCCAC GTGACTCGGC ATATCCGCCA AAATCTACCA CATGATCCTC CGCTTCGAGG TTCACAGAAT CCAATTCGTC GGTTCTGTAA CACCGTGGCA GAGCCAGAAA CACTCTCGAG TTTTGGTCAG CACGAAGACG CCAGCAATCA TCAGGTCATG GATTTTCCAG GAGGAAAGGT AGCTTTCACA CCTGAGATTC GATTCATATC AGAATCCGAT TCAGACCGTG TTCCTTGCTA CCGTGTTCTT GATGACAATG GCCAACTTAT CACCAACAGC CAGTTTGTTC AGGTTAGCGA AGAAGTTGCC GTAAAGATAT ACAGCGATAT GGTTACTCTT CAAATAATGG ATAACATATT CTACGAAGCT CAGAGACAAG GCAGACTTTC CTTTTACGCT ACTGCAATCG GTGAAGAGGC CATTAATATT GCATCAGCTG CTGCTCTCAC CCCTCAAGAT GTTATCTTTC CTCAGTACAG AGAGCCTGGT GTTCTGTTAT GGCGTGGTTT CACTCTTCAA GAATTTGCAA ACCAGTGTTT TGGGAACAAA TCTGATTATG GAAAAGGCAG GCAGATGCCA GTCCACTATG GCTCTAACAA GCTCAATTAT TTTACCGTTT CTGCAACAAT TGCTACGCAG TTACCAAATG CGGTTGGTGC TGCTTATTCC TTAAAGATGG ACAGGAAGGA TGCATGTGCA GTCACATATT TTGGCGATGG TGGCACGAGT GAGGGAGATT TCCATGCTGC TTTGAATTTT GCAGCAGTTA TGGAAGCTCC TGTTATATTT ATTTGCCGGA ACAATGGATG GGCAATCAGT ACTCCCACCT CAGATCAGTT CCGAAGTGAT GGTGTAGTGG TCAAAGGCCG GGCCTATGGC ATTCGAAGTA TACGTGTGGA TGGAAATGAT GCACTTGCTA TGTACAGTGC GGTGCATACT GCTCGCGGAA TGGCAATTAG CGAACAGAGG CCAATCTTGA TTGAGGCCTT AACATACCGC GTAGGACACC ATTCAACATC AGATGATTCC ACAAGGTACC GCTCTTCTGA TGAGATAGAG TGGTGGAACA AAGCAAGAAA CCCGTTGTCT AGGTTTAGGA CATGGATTGA AAGTAATGGC TGGTGGAGTG ATGAAGCAGA ATCGGATCTG AGAAGCAGAA TCAAGAAAGA GATGTTAGAA GCGCTCCGGG TTGCAGAGAA GACTGAGAAA CCGAATCTGA AGAACATGTT CTCAGATGTC TACGATGTTC CTCCTTCTAA CCTGATGGAA CAAGAACTTC TGGTGAGGCA GACGGTCAAT AGTCACCCCC AAGACTACCC AACAGATGTT CCTCTTTAG 
Length1419
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3558272.. 3560818
Download Sequence
A.thaliana
AGI-codeAT5G09300.1
DescriptionThiamin diphosphate-binding fold (THDP-binding) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg487223 Galactose oxidase/kelch repeat superfamily protein
9.38083 Ahg311338 translocon at the outer envelope membrane of chloroplasts 33
10.9087 Ahg475310 RNA-binding (RRM/RBD/RNP motifs) family protein
12.2474 Ahg483241 Nucleoporin interacting component (Nup93/Nic96-like) family protein
14.6969 Ahg485468 Protein of unknown function (DUF3353)
20.4939 Ahg474056 Complex I subunit NDUFS6
20.6882 Ahg482852 Pentatricopeptide repeat (PPR) superfamily protein
22.5389 Ahg891152 aconitase 3
24.7184 Ahg495287 Sugar isomerase (SIS) family protein
24.9199 Ahg474984 Protein of unknown function (DUF3741)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression