Detail


ID : Ahg351109

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351109|fgenesh1_pg.C_scaffold_6001702
Sequence
ATGGCTACCG TTGGTCAGCA GCATCTCTAC CGGCCAATAC TCACCGCCGT CGGAAGTGAT TGCCGGAGGC TCGTAACCAC CCGTTTCCTC CCTGTTCCAA GGCGCAATTT TAACTCCCGG CTGCGGCAGA TATTGAGTCT TGAGGTTGGC AAGGAAGTGG CTCCGGCATC GTCGACGGTG AACATGGAAG AGCTCGTCGG ATTCTTGTAC AAAGATCTTC CTCACCTCTT TGACGACCAA GGAATCGATA AAACGGCGTA CGATGAGCGG GTGAAGTTCA GAGATCCAAT CACTAAGCAC GACACCATCT CCGGTTATCT CTTCAACATT TCTCTTCTCA AGAATATCTT CACTCCTCGA TTTCAACTTC ACTGGGCTAA ACAGACAGGT CCATATGAGA TAACTACAAG ATGGACAATG GTGATGAAGT TTATGCTTTT ACCATGGAAA CCAGAGCTTG TCTTCACTGG TACATCAATC ATGGAAGTTA ATCCTGAAAC TAAGAAATTT TGCAGCCATC TGGACTTGTG GGATTCTATC AAGAACAACG ACTACTTTTC TCTGGAAGGT CTTGTTGATG TATTTAAGCA GTTACGGATA TATAAAACGC CAGATTTGGA AACTCCAAAG TATGAAATAC TGAAAAGAAC AGCAAACTAT GAGGTCAGAA GGTATGAACC CTTCATAGTG GTGGAGACAA ACGGTGACAA GCTTTCAGGC TCTTCAGGTT TCAACAATGT TGCTGGCTAC ATATTTGGCA AAAACTCGAC GATGGAGAAA ATACCAATGA CAACCCCAGT GTTTACCCAA ACAACAGATA CTGATCAACT CTCTTCTGAC GTCTCTGTAC AAATTGTTAT TCCATCAGGA AAAGATCTCA GCAGCTTACC GATGCCTAAT GAAGAAAAGG TAAACTTGAA GAAGTTGGAA GGCGGATTTG CTGCAGCAGT GAAATTCAGT GGGAAACCGA CAGAGGAGGT TGTCCGCGCA AAAGAGAATG GTCTGAGGAG CAGTCTGAGT AAAGATGGTC TTAGAGCTAA GAAAGGTTGT ATGCTTGCTC GTTACAACGA TCCAGGACGA ACATGGAACT TCATAATGAG GAACGAAGTT ATCATATGGC TTGAAGATTT CAGTCTGGAT TAG
Length1143
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8110700.. 8112530
Download Sequence
A.thaliana
AGI-codeAT5G20140.2
DescriptionSOUL heme-binding family protein
TAIR curator summary
Alias[AtHBP5][HBP5][haem-binding protein 5]
Gene coexpression
MR
MR Locus Description
3 Ahg494103 acclimation of photosynthesis to environment
7.14143 Ahg477631 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein
7.48331 Ahg930544
12.9615 Ahg939248 Acid phosphatase/vanadium-dependent haloperoxidase-related protein
17.2047 Ahg494803 FtsH extracellular protease family
18.1659 Ahg925420 plastid transcriptionally active 4
20.7364 Ahg488935 sucrose phosphate synthase 1F
20.8327 Ahg486043 UDP-glucose pyrophosphorylase 3
23.3666 Ahg472566
24.6577 Ahg472530 SNARE associated Golgi protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression