Detail


ID : Ahg925420

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925420|scaffold_200981.1
Sequence
CAGTTCCTTC CGCCATTGAA ATGGCTCTCA AAGCTTCACC AGTTGCCGGA TTATTCCCTC CTCTCCGTCC TACTGCTTCT TCTTCTCCTT CGACTTCTAA TCGCCCTTGT TCCCTCAGGG TTCTACCCCT CAGACCATCC TTCTTCGGTA ACTCCAGTGG AGCGCTGAGA GTGAATGTGC TTAGATTAGC TTGTGCAAAT AGACTCAGGT GCAATGGTCA TGGTGCTACA ATGAATCTTT TTGAACGATT TTCTAGAGTG GTCAAGTCAT ATGCCAATGC GCTCATAAGC TCTTTTGAAG ACCCGGAGAA AATCCTGGAG CAAACTGTCA TTGAAATGAA TAGTGATTTG ACAAAGATGC GTCAAGCCAC TGCACAGGTT TTAGCATCAC AAAAGCAGTT GCAGAACAAA TATAAAGCGG CACAGCAGTC TTCTGATGAT TGGTACAAAA GGGCACAACT TGCTCTTGCA AAAGGAGATG AGGATCTTGC ACGTGAGGCC CTTAAACGAC GAAAGTCTTT TGCTGACAAC GCAAGTGCTC TGAAAACTCA ACTAGATCAG CAAAAAGGTG TTGTCGACAA TCTTGTTTCA AATACAAGGC TCTTGGAGAG TAAGATACAA GAGGCAAAAG CAAAGAAAGA TACGCTCCTT GCACGTGCTC GCACTGCTAA GACTGCAACC AAAGTGCAAG AGATGATAGG GACAGTAAAT ACAAGCGGTG CTCTTTCAGC TTTTGAGAAA ATGGAGGAGA AAGTGATGGC TATGGAGTCT GAAGCAGATG CACTAACTCA GATTGGAACC GATGAACTCG AGGGGAAGTT TCAAATGCTT GAAACTTCAT CTGTGGATGA TGATCTTGCG AACTTGAAGA AAGAATTGTC CGGAAGCTCA AAGAAAGGAG AGCTTCCTCC AGGGAGAAGC ACCGTTGCAG CAAGCACGAG ATACCCTTTC AAAGACTCAG AGATCGAGAA TGAGTTAAAC GAACTGCGAA GGAAAGCTAA CGACTTTTAG ATATCGGCTG TTTCCGAGTT GT
Length1032
Protein Sequence
Protein Residue
Map Locationscaffold_2: 7901997.. 7906214
Download Sequence
A.thaliana
AGI-codeAT1G65260.1
Descriptionplastid transcriptionally active 4
TAIR curator summaryEncodes a protein required for thylakoid membrane formation.
Alias[PTAC4][VIPP1][plastid transcriptionally active 4][VESICLE-INDUCING PROTEIN IN PLASTIDS 1]
Gene coexpression
MR
MR Locus Description
7.93725 Ahg488341
9.16515 Ahg337713 ABC transporter family protein
11.8322 Ahg471438 vacuolar ATP synthase subunit C (VATC) / V-ATPase C subunit / vacuolar proton pump C subunit (DET3)
13.5647 Ahg474728
16.0624 Ahg491390 glycine decarboxylase P-protein 1
16.2788 Ahg312200 starch synthase 3
17.3494 Ahg932631 glutathione peroxidase 1
18.1659 Ahg351109 SOUL heme-binding family protein
20.1246 Ahg922501 one-helix protein 2
21.7715 Ahg477379 PsbQ-like 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression