Detail



ID : Ahg354696

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|354696|fgenesh1_pg.C_scaffold_7001869
Sequence
ATGGAGCTTA TAAACATCAC CATTGGTTAC AAGACTGAGC AATGTGACTT CGCATCTGAT GAAGCTAGCT TCCAACACAA TGCTGATGAG TTTCAATGTG TCAAATCTGT TTATTCTACT CCCACAAGAG AACAATTCCA AAATTGCTTG TCCACAAAAC AATTCAATTC AACCTTCCAA AACCCTATAA ATCTCACCAC TCATAAACCA GATTCCCGAG TCTACACCGA CTTTTCCGAA TCTTCATCTC CAAATTCTAC TTTCCTCAAC TTGAATTTCA CCAGTTTGAA GCCGATTCTG ATCGTAAAAC CGAAATCCGA ATCCGAAATC AAACAATCAA TTCTATGCAG CAGGAAACTT GGAGTACAAG TAAGAACCAT GAGTGGTGGT CATGACTACG AAGGTCTATC TTACCTCTCA CAATCACCAT TCATAATCGT TGACCTCGTT AACCTCAGAT CGATCAACCT CAACCTCACA GACGACAACG CTTGGATCCA ATCGGGCGCA ACACTCGGCG AACTCTATTA CAAAATCGCC AAAACCAGCA AGATCCATGC CTTTGCCGCA GGGATATGTC CAAGTGTTGG TGTTGGCGGG CATATTAGCG GTGGAGGATT CGGTACAATA ATGAGGAAAC ACGGTTTAGC GTCTGATAAC GTTGTAGACG CGCGTTTGAT GGACGTAAAT GGGAAAATTC TTGACCGGAA AACGATGGGG GAGGATTTGT TTTGGGCGCT AAGAGGCGGT GGAGCTGCAA GTTTTGGCGT TGTCTTGTCA TGGAAGGTTA AGCTTGCTAG GGTTCCTGAA AAGGTTACTT GTTTCATAAG TCAACATACG ATGGGACCGA GCATGAACAA GCTTGTTCAT AGATGGCAAT CCATAGGATC AGAGCTAGAC GAAGATTTAT TCATCAGAGT TATTATTGAT AACAGTCTAG AAGGGAATCA AAGAAGAGTG AAATCTACAT TTCAAACTCT TTTTCTTGGT GGAATCGATA GATTGATTCC TCTGATGAAC CAGAAGTTTC CGGAACTCGG TTTACGATCT CAAGACTGCT CGGAAATGAG CTGGATCGAA TCGATAATGT TCTTCAACTG GAGATCAGGA CAGCCGTTAG AGATTTTGCT CAACAGAGAC CTAAGATTCG AAGATCAGTA TTTCAAAGCA AAATCAGATT ATGTTCAAAA ACCCGTTCCT GAAAACGTTT TCGAAGAAGT AACCAAGAGA TTTCTCGAGC AAGATACTCC ATTGATGATC TTCGAGCCAT TGGGTGGGAA AATCAGCAAG ATTTCAGAAA CAGAGTCTCC ATATCCACAC AGGAGAGGGA ATCTGTATAA TATACAGTAC ATGGTGAAAT GGAAAGTGAA TGAAGTCGAG GAGATGAACA AACATGTTAG GTGGATGAGA TCGCTACACG ATTACATGAC TCCGTATGTT TCTAAATCGC CGAGAGGAGC TTATTTGAAT TACAGAGATC TTGATTTGGG CTCGACCAAA GGGATCAACA CAAGTTTCGA AGATGCGAGG AAATGGGGTG AGACATATTT CAAAGGTAAC TTCAAGAGAT TGGGTTTGGT TAAAGGGAAG ATTGATCCCA CAAATTTCTT CAGGAACGAA CAGAGTATTC CTCCTCTGTT TTGA 
Length1644
Protein Sequence
Protein Residue
Map Locationscaffold_7: 8934342.. 8937027
Download Sequence
A.thaliana
AGI-codeAT4G20860.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg494916 receptor-like protein kinase-related family protein
8.24621 Ahg475116 WRKY family transcription factor
9.74679 Ahg496608 Peroxidase superfamily protein
10.8628 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
11.8743 Ahg492857 VACUOLAR SORTING RECEPTOR 7
19.6214 Ahg471045 NAD(P)-binding Rossmann-fold superfamily protein
20.347 Ahg495173 Clp ATPase
21.166 Ahg480771
21.6795 Ahg481994 cytochrome P450, family 71, subfamily A, polypeptide 13
22.0454 Ahg494088 Thioredoxin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression