| Annotation |
|---|
| Description | jgi|Araly1|936257|scaffold_500448.1 |
| Sequence |
TTTTCTTTTT TTTTTGAGCA ATGTCTTCTT CTGCAATGTC TTTCCAATCT ATCTCCATGA CAACTCTCAA CAATCTCTCA TGTAATCAAC AATTTCATCG AAGCTCTCTT CTTGGTTTCT CTAAATCCTT CCAAAATCTT GGTATCTCAT CTAATGGTCC AGATTCCTCC TCTAGATCAA GTTTCACTCC CAAGAAGAAA CTCACTCCTA CTCGAGCTCT CTCCCAGAAC TTGGGAAATA CCGAAAACCC CAGACCAAGT AAAGTTCAAG AACTGAGCGT GTACGAAATC AACGATTTAG ATAGACACAG CCCAAAAATT CTTAAAAACG CATTCAGCTT TATGTTCGGT CTCGGAGATC TTGTCCCATT CACAAACAAA CTCTACACCG GCGATCTCAA GAAACGCGTG GGAATCACGG CAGGTCTCTG TGTCGTCATC GAACACGTCC CGAAGAAAGG TGAAAGATTC GAAGCTACTT ATAGCTTCTA CTTCGGAGAC TATGGACACT TGTCCGTTCA AGGACCGTAC TTGACTTACG AGGACTCGTT CCTCGCCATC ACTGGTGGCG CTGGAATCTT CGAAGGTGCG TACGGACAAG TTAAGCTTCA ACAGATTGTG TATCCGACAA AATTGTTCTA CACTTTTTAC CTTAAAGGGT TGGCTAATGA TTTGCCATTG GAGCTCACCG GAACGCCGGT ACCCCCGTCT AAGGACGCGG AGCCAGCACC GGAAGCTAAG GCGCTTGAGC CCAGCGGAGT TGTAAGCAAC TTTACAAATT AGTGAATAAA ATTAGTCTTA TC |
| Length | 802 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 2308300.. 2309329 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G25760.1 |
| Description | allene oxide cyclase 1 |
| TAIR curator summary | encodes allene oxide cyclase. One of four genes in Arabidopsis that encode this enzyme, which catalyzes an essential step in jasmonic acid biosynthesis. Gene expression is induced during senescence, a process that involves jasmonic acid signalling pathway. |
| Alias | [AOC1][ERD12][allene oxide cyclase 1][early-responsive to dehydration 12] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5 |
Ahg355235 | hydroperoxide lyase 1 |
| 7.48331 |
Ahg324952 | Protein of unknown function (DUF1012) |
| 7.54983 |
Ahg493370 | beta-amylase 5 |
| 9.16515 |
Ahg472193 | chlorophyllase 1 |
| 9.38083 |
Ahg474366 | TSK-associating protein 1 |
| 10.7238 |
Ahg946577 | cellulose synthase-like A01 |
| 11.5326 |
Ahg945750 | Tyrosine transaminase family protein |
| 12.8452 |
Ahg484907 | lipoxygenase 2 |
| 14.4914 |
Ahg317230 | acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase |
| 16.4924 |
Ahg490462 | TRICHOME BIREFRINGENCE-LIKE 26 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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