Detail



ID : Ahg357610

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|357610|fgenesh1_pg.C_scaffold_8001397
Sequence
ATGGAGACCG CTTCGAGCGT AGCTGCAACT CGTGGCGGTT CCCTTCAGAA TCCGTCGCCG ACGGCTACGT CAAGAAAAGA ATGGCGCGCC GTTTCGGATT CACAAGACAC TACAGATTAT GTGGATTTGG AACAGTTAAA GCTAAATCGG ACAGATGAGA GAACGATTTA TGAGTTTTTT TACGTATTGG AGAGTGGGAA CGACATTTTA ATGGGGCTTC TTGTAGCGCA GAATGGAAGA GAGCAGGATG GTTATTCAAA TAGTGAGATG TTGCAGCAAC AGATTCTTAA TGTTTCTAGA AAGAAAGGAG AACTTCAGCA GTTGGAGATT GAGCTTCGAG CTCAGATGAT TGCGAGACAT GAGATCATGG AGATCCAGAG CAACTATGAA TCTCAATTCA CAGAGTATGC TAATGCTTCT GCTAGAATGC AGGAGCAACT TCATGAGAAG GAGAGATCTA TTCGGGAAGC AGAGAGGAAG TTAGAAGAGA AAGACAGAGA GCTACATGCG ATTAAACTGG ATAATGAAGC GGCCTGGGCC AAAGAGGGTA TCCTAAGAGA ACAAAATAAA GAACTTGCCA CATTCAGAAG AGAGCATGAT CACTCTGAAG CTGAGAGGTC CCAAAATATA CATAAAATAT CTGAACTTCA GGAGCATATT CAAGAGAAAG AGAGCCAGCT CAGTGAATTG CAGGAACAAA ATAGGATTGC TCAAGAAACT ATCTTGTACA AGGATGAGCA ACTAAGAGAA GCACAAGGTT GGATTGCCCG TGCCCAAGAG ATGGATGCTT TACAATCATC TACAAATCAT TCGTTGCAGG CTGAATTGCG AGAACGTACT GAGCAGTATA ACCAGCTCTG GCATGGTTGT CAGAGACAGT TTGCAGAGAT GGAGAGATTG CATTTGCATA CAGTGCAACA GCTTCAGCAT GAGCTTGCCA ATGTAAGGGA AGCAGGTGGT TCCAAAACAA ATTCCAGCGG TGCCTCCCAG ACTATTCAGA ACAGCGGGAA CCAATTTGAT GCTCATGGAA ACAGCGCAGA AAGTGCAAAC ATTAGTGCAG ATAACATCTC ATCTTTTACT TCAACTGATG ATAAGGCTAC CCAGAACAAC CGTGTTGATA GGATGTCATC TTCTAATCTT GGGACGCATG GGTACCTTCA AGCGGGTCAG ATGACCCCTC TGCATTCGTT TGTCATGCAT CAACAAGAGA TTTCTCAGCT TGTTCAGCCT CAGGTCCCTT CACCTCATTT TGCACAATCA GTGTTGCTGC AGCAAAAGGC TGTACCAGAT AGTTCACAGA TGCCTATGCA GAATCATGTG CATCCATCTC AAGGTGCTCA TGGCTTGGTA CAGTCCTTTG GTCAAGGGTA TGGAGATATT CAAACTAGCC AAGTAGCACA ATATGGAGCT ACGACACCAT CGTCCTCTGT GAATGAACAG GCAGTGGAAT CTGGCAATGG AGATTATAAT GGATCTCATC AGTCAGAGAA TAACTTTCAA GACATTTCTT CACAGTTCCG TGATGTGCTA AGGCTTGATT CCCATACCCA TAATCAGAAA CCTGAGGAAG CTAATGGTCA GGTTTCACCT GACGAGCACA ATGGTGCTAA ATCCATTGTC TCTGAAACTC TAGTCTCATC TGGGAAACCT GAGAGGAACT CAGAGAGTGC TCTGCTCGAT GAAAGGTCGC TTTTGACATG CATCCTCCGT ACTATACCAG CTGGTGGAAG AATCAGAATC AGTTCAACGC TTCCAAACCG TTTGGGCAAA ATGCTAGCCC CTCTGCACTG GCATGATTAC AGGAAAAAGT ACGGGAAGCT GGACGATTTT GTTGCTAGCC ATCTTGAGTT ATTTGCGATA GAGGATGACT ACATTCAAGT TAGAGACGGT GCACAGAAAA TGGTAGCAGC TTCAGCAGCA GCAGCCAAAG TGGCAGCAGC AGCTGCAGCG TCGTCATCCC CAAACTCCAT CTATGTGGCT ATGACTCCTA TGGCTCAGTC CCAAGGGTTA AAGAAGAATG ACAACAGAGG TAGGCAGAGC TCTGATTTTA TGGTGAAGCA GCAAAGAAAG CTCTGA 
Length2076
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14966684.. 14970427
Download Sequence
A.thaliana
AGI-codeAT5G53620.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg938850 DNAse I-like superfamily protein
1.73205 Ahg903316 DNA-damage-repair/toleration protein (DRT102)
6.48074 Ahg493790 Tetratricopeptide repeat (TPR)-like superfamily protein
8.83176 Ahg348499 Concanavalin A-like lectin family protein
9.16515 Ahg943318 damaged DNA binding protein 1A
9.74679 Ahg476319 histidinol phosphate aminotransferase 1
11.3137 Ahg477212 tetratricopeptide repeat (TPR)-containing protein
11.4018 Ahg938338 Transducin/WD40 repeat-like superfamily protein
11.4891 Ahg485507 Malectin/receptor-like protein kinase family protein
13.8564 Ahg933693
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression