Detail



ID : Ahg938338

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938338|scaffold_502529.1
Sequence
CTTAAAAGAA GGAAGAAGTA GATGGAAGGA AGAAGGATTA CGGCAAGCCC TAGACCTTGT AGTGGAAGAA GAGTTGTGGC TAAAAAAAGG TCTCGACCCG ATGGATTCGT CAACAGTGTT AAAAAGCTTC AACGGAGAGA AATCTCATCT CGTAAAGATC GAGCTTTCTC TATTAGCACC GCCCAGGAGA GATTTCGTAA CATGCGTCTC GTGGAGCAAT ATGATACTCA CGATCCAAAG GGGCACTGTC TAGTTGCATT ACCGTTTTTG ATGAAAAGAA CTAAAGTTAT CGAGATTGTT GCCGCCAGGG ACATTGTTTT TGCGCTTGCT CATTCTGGTG TTTGCGCAGC TTTTAGTAGA GAGTCGAACA AAAGAATATG CTTTTTAAAT GTTAGTCCAG ATGAAGTCAT CAGGAGCTTG TTCTACAACA AAAACAATGA TTCTCTCATC ACAGTTTCTG TTTATGCTTC AGACAATTTC AGCTCTTTGA AATGCAGATC CACTCGAATT GAGTATATTC TGAGAGGTCA GCCAGATGCA GGGTTTGCTC TTTTTGAGTC TGAATCATTA AAGTGGCCTG GTTTTGTTGA GTTTGATGAT GTCAATGGAA AGGTGCTGAC TTATTCTGCG CAGGACAGTG TGTACAAGGT TTTTGATCTG AAAAACTACA CAATGCTATA TTCGATATCA GATAAAAATG TTCAGGAAAT TAAAATCAGT CCAGGGATAA TGTTACTGAT CTTCAAGAGA GCTGCCAGTC ACGTTCCTCT GAAGATTCTG TCGATAGAAG ATGGCACAGT TCTCAAGTCC TTCAATCATT TGCTTCACCG AAACAAGAAA GTTGATTTCA TTGAACAATT CAATGAGAAA CTTCTTGTTA AGCAAGAGAA TGAGAACCTC CAAATTCTTG ACGTCAGAAA TGCTGAGCTA ATGGAAGTTA GTAGAGCTGA GTTCATGACA CCGTCTGCAT TCATATTTCT GTATGAGAAC CAGTTGTTTC TGACATTCAG GAATCGAAAT GTTTCTGTGT GGAATTTTCG CGGAGAGCTC GTGACTTCCT TTGAGGACCA TCTTCTATGG CATCCAGACT GTAACACAAA TAATATCTAC ATAACAAGTG ATCAAGATCT GATCATCTCG TACTGCAAAG CAGATACCGA AGATCAGTGG ATAGAAGGAA ATGCTGGATC GATCAATATC AGCAATATAT TGACTGGGAA ATGCTTAGCT AAAATTACAC CAAGCAGTGG ACCTCCAAAA GAAGATGAGA GCAGCAGCAG TAGTTGTTTG GGAAAGAACT CAAAGCAAAG AAGAAACGCG GTAGCTGAAG CTTTGGAAGA CATAACCGCT CTTTTCTATG ACGAAGAACG CAATGAGATA TACACAGGAA ACAGACACGG CCTTGTTCAT GTGTGGTCCA ATTGATTTCA CATTACATCA TCATCGTTAG C 
Length1451
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15971495.. 15973645
Download Sequence
A.thaliana
AGI-codeAT3G54190.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.40312 Ahg942027 Protein of unknown function (DUF3411)
7.54983 Ahg491060 RNA polymerase II large subunit
8 Ahg488375 RNA-binding KH domain-containing protein
8.12404 Ahg904230 varicose-related
9.16515 Ahg473977 Stabilizer of iron transporter SufD / Polynucleotidyl transferase
11.4018 Ahg357610
12 Ahg940194 TUDOR-SN protein 1
13.0384 Ahg477251 Pre-mRNA-processing-splicing factor
13.2288 Ahg943539 Vps51/Vps67 family (components of vesicular transport) protein
16.2481 Ahg482133 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression