| Annotation |
|---|
| Description | jgi|Araly1|358320|fgenesh1_pg.C_scaffold_8002107 |
| Sequence |
ATGGTTGGAG TAGAAAAGAG ATCCGAGATG GTTGGAGTAG AAAAGAGATC CGATATTATG CATAATCTGT TCGGAGATAA TTCCGAGGAA GAAGAGATCG AATCCGAACA TGAATCCAAT CGTCAGCCAA ACTACGCTTC TGTAACTCTC TCCCTCTTTA TCTCCTTCGT TTCATCGCTA TTGATTGTTT CAGTTTTCGT ATTTTTCACT GCCACTGTTT TTGAATTACA CCTTGGAATG CGAATGGATG AGGCCGAGGG CGGAGTGGAG CCTGAAGGAG AAGGTGAAGC TGAGGTTGAA GTTCACGGAG AGGCTGAAGT TGAGTCTGAC GGGGAACAGG GAGATGTAGA ACTTGATCCT GGAGAAAGTG AGGGTGAGAG AGAGCAAAGT TCACAGGAGG TTGATGTTGC TGATCCACAA GAGGAAAGTG AAGCAAGAGA TAGTGATAGT GATAATAAAA AAGAAGAACA TGGGGGTAGA GTAGCCAAAA ACAGAAGGCA GGATGTTGTT GAGAGTGGAT CAGAGAGGTC TGGTGAAAAG CAGTACGAGT CTGAAGATGA AGAGGTTGAT CAGACTAGGA GTCCAAGGTT CCTTGGGTGT TCAATTTTTC TTATGGATCA CTTTGTCTCC TCTACATGGA AAAACGCCAT GGTGGGTACG TCACCTAGTG AGGAGAAGGA AGAGGCTCAA GTTGCACAGT CAGACGCAAA TATTCGTAAT GTATTTGGAT CTTCGGATGA TGAAGATGCA GAAGAATATG TTCGGAATGA CGTTGAGCAT TTTACAGAAT ATCTGTTCCC GTTCCAGTGC TTGCTTCCTC TTAGAAACCA TAGAAATGTG CATAGATCGC CAATCGAAGA TGAAGAGGGC TCTGAGAAGG ATCTGAGACC CGATGATATG GGGCTTGATG ATATGCTCCC TGAAGAGGAT CCTCAATACG AGTCAGAAGC TGAGCATGTT GAAGCTAGGT ACAGGGAGAA GCCAGTTGGC CCCCCTTTGG AAGTGGAGGT TCCTTTCCGC CCTCCTCCAG GTGACCCCGT TAAGATGAAC ATGATAAAAG TTTCCAATAT CATGGGAATT GATCCAAAGC CATTCGATGC CAAAACATTC GTTGAAGAAG ACACATTCGT GACAGAAGAA CCTGGAGCAA AGAAGCGTAT TCGTTTGGAA AATAATATTG TTCGCCATAG GTTTGTTAAG AGTCGAGATG GCAAAACATA TACTGAAAGT AATGCTCGGT TTGTAAGGTG GTCAGATGGG AGCTTACAGC TATTGATAGG AAACGAAGTT CTTGACATAA CTGAACAAGA TGCAAAACAA GACCAGAATC ACCTCTTTAT CAAACATGAA AAGGGTATCC TTCAATCACA AGGAAGAATT TTGAAGAAAA TGAGATTTAT CCCATCATCT CTAACGTCAA ATTCCCATAG GCTTTTGACT GCCCTTGTTG ACTCGAGGCA GAAGAAGGCC TTCAAAGTTA AGAACTGTGT CACTGACATT GACCCTGAGA GGGAGAAGGA GAAGAGAGAA AAGGCGGAAA GCCAAAACCT CAAGGCTAGT ACAAAGCTGA GTCAGGCGAG GGACAAAATC AAGCGCAAGT ATTCACTTCC TGTTGAAAGG AGACAACTTT CCACCGGCTA CTTGGAAGAT GCTCTTGATG AGGATGACGA GACAGACCAC TATGGTTCTC ACCGTTCAAA CCGTGGCTAC GAGGAGGATC TCGAAGCTGA AGCGCAACGG GAGCGCCGGA TTCTGAACGC CAAGAAGAGC CGCAAAGGCA TTCCGGGGAG GTCTTCAATG ACTTCGGCCA GACCGTCAAG ACGTCAAATG GAGTATTCTG AGAGTGAGAG AGAGGAATCA GAATATGAGA CGGAAGAAGA AGAGGAAGAA AAGTCACCGC CGCCCCGTGG TAGAGGAAAG GAATCAGAAG ATGAATATGA GGAAGATGCA GAAGAAGATG AAGATGAAGG AGGAGGAAAA TCTAACAGAT ATTCAGATGA AGACGAAGAA GAGGAAGAGG CTGCGGGAGT AAGGGCAGAG AAGGATCACC GTGGAAGTGG CCGGAAAAGG AAAGGGATTG AGTCTGACGA GGAGGAGTCT CCGCAGAGAA AAGCTCCGAC TCATCGTCGT AAGGCCGTGA TTGATGACAG TGACGAAGAT TAA |
| Length | 2163 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18686069.. 18690001 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G61150.1 |
| Description | leo1-like family protein |
| TAIR curator summary | Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold. |
| Alias | [VIP4][VERNALIZATION INDEPENDENCE 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4 |
Ahg910790 | Transducin/WD40 repeat-like superfamily protein |
| 4.89898 |
Ahg474663 | CBS domain-containing protein / transporter associated domain-containing protein |
| 7.2111 |
Ahg488536 | SART-1 family |
| 8 |
Ahg494432 | Leucine-rich repeat (LRR) family protein |
| 8.83176 |
Ahg484347 | Protein kinase superfamily protein |
| 10.0995 |
Ahg479734 | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein |
| 10.8628 |
Ahg494507 | DNA-directed DNA polymerases |
| 11.6189 |
Ahg474695 | isocitrate dehydrogenase |
| 11.6189 |
Ahg476192 | cyclin-related |
| 11.8322 |
Ahg493750 | ALWAYS EARLY 4 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|