Detail



ID : Ahg474663

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|474663|fgenesh2_kg.1__4617__AT1G55930.1
Sequence
TAAAGAGGAG AAGAAATTGG TATACTCTAT CGCCGGAGAC ATTTCTATTC ATATGGAACT TGATTTATCT GTTCTAGGTC GTTCTTTCAT TGCCACCAGG AGGAACTCAA GTCTCACGCG ACTATGTATC CAAAGTTCGA ATTTTTCACT AAGACTTCTT CAGAGAAACA AGCAGCGCCC ACTCTGTATC TTGACTAATC TCTCAAGTTC CAGTTTTATT AGATTCCGAA AGGGATGTGA CTTTAGCCAT AGAAATCAGT TTGTTGTGTT GAGTGCGACT GAAGATCATG TGGGTAGTAG TCAGAAACAT TCCGATTCCA GCGAAAAACT CGATTCGATT AGGATTTTGC TGAAACGGGG AATCGTTTTA GGGGCAGTGG TGTGTGGAGT TTTGTTGTAT GGATGTGGTA AAGTATTAGC ATCAACAAAT GTGGTGGATG TGGCTTTTAG TAAGAGTGTA TTGTTGTTGA AGAATGCTTG GCCAAAAACT TCTCAGGTTC TTAAGGTTCT TAGAGAGCAA GGTCTAATAT TAGCTGTGCT TCTCGGTTTA TCAGCATTCT TCTCCATGGC AGAGACTTCC ATCACCACTC TCTGGCCGTG GAAGGTGCGC GAGTTGGCTG AAAAAGAGCC TGAAAATGGC GTTTTCAGGA TGCTCCGCAG TGATGTTACC AGATTCTTGA CAACCATACT TATTGGAACA ACTGTTGTGA ATATTGCGGC GACTGCCTTG GTCACTAAAG CAGCAACAGC TATTTTTGGT GAAGCTGGTG TTAGTGCAGC CACAGGAGTG ATGACGGTAG CCATATTACT CCTGACTGAA ATAACTCCGA AAAGTGTAGC GGTTCACAAT GCTCAAGAGG TTGCAAGGAT TGTGGTCAGA CCAGTGGCTT GGCTTTCCTT GATATTATAT CCTGTTGGAA GAGTAGTGAC ATATCTTTCG ATGGGAATTC TGAAAATTCT TGGTTTGAAA GGACGGAGTG AGCCATATGT TACTGAAGAT GAATTGAAAC TAATGCTACG CGGAGCAGAA TTAAGTGGAG CTATAGAAGA GGAAGAGCAG GATATGATTG AAAATGTGTT AGAGATAAAG GATACGCATG TTCGAGAGGT GATGACTCCT CTTGTTGATG TAGTTGCAAT AGATGGCAGC GGCAGCCTGG AGACCATAGT GGTGCACTTT TGTGGAATGA ATTTATATGT TTCTTCTGTT TTGCAGGGTA AATTGCTTGA AAGTACCACT GTGGTGGACA TGGCTCATAA ACCTGCATTC TTTGTCCCTG ATTCGATGTC AGTTTGGAAT CTTCTTAGAG AGTTTAGAAT AAGAAAGGTT CACATGGCAG TTGTTCTTAA TGAATACGGT GGAACCATCG GAATAGTAAC TCTTGAAGAT GTGGTCGAAG AGATTGTTGG TGAAATATTT GATGAAAACG ATTCAAAGGA GGAAATTCAG AAGAAAACGG GTTATATCGT GATGAGAGCA GAGGGGATAT ATGATGTTGA TGCCAACACT TCGATAGACC AGTTATCTGA AGAACTCAAC ATAAAGATGG CAGAGGGCCA TCAGTATGAG ACAGTCTCAG GTTTTGTCTG TGAGGCCTTT GGGTATATCC CAAAGACAGG TGAGAGTGTG ACGGTGGTTC TTGAAAAGGA AAACTGGGAA GAGAATGATG AACAAGACGA GGGTAAGCAG GAGCGTCAAG ATCAGAAGGA GAAGCACCAA ATTTATAGAC TAGAGGTACT AGCAGGGAAT GCCAGAAAAG TGAGTGCAGT CCGGTTCGAA CGAGTTAATG ATATGGATCA AGTGTCAGAG GCCCGGGATG TGAAAAACAT GGTTCCCAAG TTCGTAAGAA AATGGAGCAG CGAGGAAGAT TCCGATGGTA ATCTCCAAGC CAAGAATGCC GTCTTTGATG AGCATCTAAT TGCTGAAACT GAAAGTATGA AGAAAGAATA ATGATAAAAG AGGAGGAAAG AGGCAGTTGT AAGTTTTAAT TGCATGTATA GAAAGACTCG TTA 
Length2013
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28112308.. 28115459
Download Sequence
A.thaliana
AGI-codeAT1G55930.1
DescriptionCBS domain-containing protein / transporter associated domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.89898 Ahg358320 leo1-like family protein
10.198 Ahg473207 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
12.0416 Ahg487092 RING/U-box superfamily protein
12.4097 Ahg482657 sequence-specific DNA binding transcription factors;DNA binding;DNA binding
15.4919 Ahg892895 Splicing factor, CC1-like
15.5885 Ahg474716 dehydrin family protein
17.9444 Ahg893682 like heterochromatin protein (LHP1)
18.303 Ahg496203 Galactose oxidase/kelch repeat superfamily protein
19.2094 Ahg493056 MEI2-like 3
23.3024 Ahg917601 phosphatidylinositol-speciwc phospholipase C5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression