Detail



ID : Ahg358770

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|358770|fgenesh1_pg.C_scaffold_8002557
Sequence
ATGGCAGAGG AAGTTAAAGG TGGATGCTTT ATACCTTACA TTCACTCCCA AACCCTAAAT TTCCACTCCC ATGCCGTCTC CTCCGTCAAA TTCTCCACCG ACGGCCGTCT CTTAGCCTCC GCCTCCGGAG ATAAAACAAT CCGCACTTAC GCAATCGACA TTGCTCAAGA AGATTCCATC GCCAAGCCCG TTCACGAGTT TTCCGGCCAC GACAACGGTG TATCGGATAT AGCCTTCTCC TCCGACGCGA GGTTCCTCGC CTCAGCTTCC GATGACAAAA CCCTTAAGCT ATGGGACGTT GAAACTGGTT CTGTGATCAA AACGCTAATC GGACACTCTA ATTACGTGTT TTGTGCTAAC TTCAATCCTC AATCCAACAT GATTGTCTCT GGTTCTTTTG ATGAGACTGT TCGGATTTGG GATGTTAAAT CTGGCAAATG CTTGAAAGTT CTTCCTGCGC ATTCTGTTCC TGTGACTTGT GTTGATTTCA ATCGTGACGG GTCTTTGATT GTGTCAAGCA GCTACGATGG GTTGTGTCGG ATTTGGGATT CTGGAACTGG GCATTGTGTG AAGACCTTAA TTGACGATGA GAACCCTCCT GTTTCCTTCG TTAAGTTCTC TCCCAATGGC AAATTCATCC TCATTGGCAC ACTCGACAAT AAGCTGGAAG AGACAGACCA TGGCCGAGCC AAAACCGAAG CTTCATGTTG CAGTGTTCTC ATGGTTAGCT TTTTGGATTC TGGAATTTTC AGGGCACAAA TTGTGGGTTG GCCTCCTGTG AGATCCTACA GGAAGAACAC ATTGGCCACC ACTTGTAAGA ATAGTGATGA AGTTGATGGG AGGCCAGGTC CTGGGACCAT GTTCGTAAAG GTCAGTATGG ATGGTGCTCC TTGTCTGAGG AAAGTTGACC TGAGGAGCTA CGCTAACTAC GGGGAGCTTT CTTCAGCCTT GGAGAAAATG TTCACCACTC TCACTCTAGG TCAATGTGGA TCTAATGGAG CTGCTGGGAA GGATATGCTT AGTGAGACCA AGCTTAAGGA TTTTTTAAAT GGAAAAGACT ATGTGCTCAC TTATGAGGAT AAGGATGGGG ACTGGATGCT TGTTGGAGAT GTTCCATGGG AGATGTTTAT TGATGTCTGC AAGATGCTGA AGATAATGAA AGGATGTGAT GCTATTGGGT TAGCTGCAGC TCCGAGAGCA ATGGAGAAAT CGAAGATGAG AGCTCAAAAG ATGGAACATG ACAAAAATTT GCATTGGATT TTAAAAATTT TCGTTTAA 
Length1278
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20747385.. 20749780
Download Sequence
A.thaliana
AGI-codeAT5G65670.1
Descriptionindole-3-acetic acid inducible 9
TAIR curator summaryauxin (indole-3-acetic acid) induced gene
Alias[IAA9][indole-3-acetic acid inducible 9]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg913430
12.9615 Ahg951404 Pentatricopeptide repeat (PPR) superfamily protein
17.4929 Ahg494898 FAD-dependent oxidoreductase family protein
22.9783 Ahg480076
25.7488 Ahg493575 xylogalacturonan deficient 1
34.5254 Ahg941893 Sterile alpha motif (SAM) domain-containing protein
39.1152 Ahg489790 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
43.0581 Ahg491934 ADP/ATP carrier 3
43.6119 Ahg916259 Protein of unknown function DUF2359, transmembrane
47.9479 Ahg916934 2A phosphatase associated protein of 46 kD
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression