Detail



ID : Ahg359413

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359413|fgenesh1_pg.C_scaffold_201000003
Sequence
ATGGGAATTT CTCATGTTTT GTCCAGGTTT TTTCATCACT TTATGCTTCA CAAGCGAGCT AGTGAAGCTA ACGATAAGAA CGATAATAGC ATCATCGGTT CCGATTTAGC ATCATCTAAG AAACGCCGTA TCGATATCAC TGATTCTTCT TCGTCTGATA ATAAGTCTTC GATTGTTGCT TCTGGTAGTA GTAGTAGTAG TAGCGGATTT CACGGCGATA GCGTCGCTCA CCAAATCGAC ATGGCTTTTG GTAATTCGAA CCGTCAGGAG ATTGATGAAG ATCTGCATAG TCGGCAGCTC GCCGTCTATG GTCGTGAGAC TATGAGGCGT CTCTTTGCTT CCAATGTTCT CATCTCGGGG ATGCACGGTC TTGGTGCCGA GATTGAAGAG GACGCTCAGA AGCTTATATC GATTGCCACA GCCATCAATA CCGGGCAGGG TGATTTAAAG GTGGAGAATG TTGACCAGAA GCTTCTACGA CACTTTTCCT TTGGAGCCAA GGCTGTCCTG AATCCCATGG CTGCAATGTT TGGCGGTATT GTTGGACAGG AGGTTGTTAA AGCTTGCTCT GGAAAATTTC ATCCTCTCTT CCAGTTTTTC TACTTTGATT CAGTGGAGTC ACTACCCACT GAACCTCTGG ACTCGAGTGA CTTTGCACCA AGAAACAGCC GGTATGATGC CCAAATATCT GTATTTGGGG CCAAGTTCCA GAAGAAACTT GAAGATGCTA AAGTTTTCAC AGTAGGGTCT GGTGCTCTTG GCTGTGAGTT CTTGAAAAAT ATGGCTCTGA TGGGGGTTTC TTGTGGAAGC CAAGGGAAGC TGACAGTGAC AGATGATGAT ATAATTGAGA AGAGTAACCT CAGTCGTCAA TTTCTGTTCC GTGACTGGAA CATCGGACAG GCTAAATCCA CAGTTGCTGC TTCGGCTGCT GCTGCTATAA ATCCCCGCTT CAACATTGAG GCCCTGCAAA ACCGTGTTGG CGCTGAGACT GAGAATGTAT TTGATGATGC CTTCTGGGAG AACTTAACTG TTGTCGTCAA TGCACTGGAT AATGTCAATG CGAGGCTCTA TGTTGATTCG AGGTGCTTGT ATTTCCAGAA GCCTCTCCTT GAGTCTGGAA CTCTTGGTGC AAAGTGCAAC ACACAGATGG TTATCCCACA TCTAACTGAA AATTACGGTG CCTCAAGGGA CCCACCAGAG AAACAAGCCC CCATGTGTAC AGTGCATTCG TTTCCGCATA ACATTGATCA CTGTTTAACT TGGGCTCGCT CTGAGTTTGA GGGTCTGCTG GAGAAGACTC CCGCTGAAGT GAACGCATAT CTCTCTAGCC CAGTTGAGTA CACTAACTCA ATGATGAGTG CTGGTGATGC TCAGGCGAGG GACACATTGG AGAGGATTGT TGAGTGCCTT GACAAGGAGA AGTGTGAGAC CTTCCAAGAC TGCTTAACCT GGGCTCGATT GAGGTATTAT CACTCTCTTA ATAGTTACGT TTAG 
Length1494
Protein Sequence
Protein Residue
Map Locationscaffold_201: 12341.. 15447
Download Sequence
A.thaliana
AGI-codeAT2G30110.1
Descriptionubiquitin-activating enzyme 1
TAIR curator summaryEncodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.
Alias[ATUBA1][MOS5][UBA1][ubiquitin-activating enzyme 1][MODIFIER OF SNC1 5]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg934323
25.8457 Ahg478309 cell division cycle 48
50.1099 Ahg931357 CLIP-associated protein
56.356 Ahg480836 H(+)-ATPase 1
57.8965 Ahg479430 presequence protease 1
71.3302 Ahg474651 ubiquitin-protein ligase 1
75.6571 Ahg478006 multifunctional protein 2
77.3628 Ahg945144
82.2861 Ahg913518 acetyl-CoA carboxylase 1
86.0523 Ahg903021 auxin transport protein (BIG)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression