Detail



ID : Ahg470463

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470463|fgenesh2_kg.1__417__AT1G04780.1
Sequence
TTGTGTTTCT TAGTTGAGAG GGTTTTAGGT TTCAAGATGA TGGAACTTGA GTTGGGTTTC TCCTTGAGAA AGATTGAGTC TTTATAAAGC GCTTTTGTTT GTTATATCCC ACTACTGAGA TATGGCAAGC ACCATTGATG TTACCAAGTA TGGTCACAGT CCTGTTCATC ACGCTGTTGT CACAAGGGAT TATGCCGGTC TCAAGAAACT ATTATCCGCT CTTCCGAAGA TGCGTGACCC GTCTGAGGTT AAAAACGAAG CAGCTTCTGT AGCCGAAGAG ACCAAAGCGG ATTCAATTGC AGCTGTTATA GACAGGCGTG ATGTAGTTAA CCGAGACACG GCTCTTCATT TGGCTGTAAA GCTCGGTGAT GAGACCTCCG CGGAGATGCT TATGGCTGCA GGAGCTGATT GGAGCTTGCA GAATGAGCAT GGATGGAGCG CTCTACAAGA AGCTATTTGT GGTAGAGAAG AGACGATCGC TATGATCATC GTTAGGCATT ATCAGCCTTT GGCTTGGGCT AAATGGTGCA GGAGGCTGCC TCGGCTTCTT GCTACGATGC ATAGAATGAG AGATTTCTAT ATGGAGATCA CTTTCCATTT CGAGAGTTCT GTTATACCTT TCATTTCTAG AGTGGCTCCG TCGGATACTT ATAAGATTTG GAAGAGGGGT GCGAATCTTA GAGCGGATAT GACATTGGCT GGGTTTGATG GTTTCAGGAT TCAAAGATCG GATCAGACTA TACTTTTTCT TGGAGATGGG TCAGAGGATG GTAAAGTTCC TTCCGGTTCT CTTCTGATGA TATCACATAA GGATAAGGAG ATTATGAATG CTCTAGACGG TGCTGGAGCT GCAGCATCAG AAGAAGAAGT TCGTCAAGAA GTGGCTGCAA TGTCCAAAAC TAGCATTTTC AGACCCGGGA TCGATGTTAC TCAAGCTGTT CTCTTCCCGC AATTAACATG GAGGCGTCAA GAGAAGACAG AAATGGTTGG GCAATGGAAA GCAAAAGTGT ATGATATGCA CAATGTAGTT GTTAGTATAA AATCAAGAAG AGTACCGGGT GCAATGACCG ATGAGGAGCT TTTCTCAAAC ACTAATCAAG AAAACGATAC AGAAAGTGAG GATCTTGGAG ATATCTTGAC GGAAGACGAG AAAAGGCAGT TGGAGTTAGC ACTCAAGTTG GATTCACCGG AAGAATCTTC TAACAGCGAG AGCTCTAGGA TTTCTCAAAA GCAGAATAGT TGTTCTTTCG AGGATCGAGA GATTCCAGTA ACGGATGGAA ACGGGTATTG CAAACAGGAA AAGAAAGGAT GGTTCAGTGG ATGGAGGAAA CGAGAAGAAG GGCACAAACG AAGTAGTGTT CCGCCAAGAA GTTCACTTAG TGTCGATGAG AAAGTAAGCG ATCTTCTTGG GGACGATGAT TCTCCATCTC GTGGAGGAAG ACCGATAAAA CCAGGAAGAC ACTCAACGGT TGAGACTGTT GTGAGGGACG AAAACCGGGG ATCAAGGGAT TCATCAAAAG CTTCAACATC AGAAGGCAGT GGAAGTAGCA AGCGAAAAGA AGGAAGCAAA GAGAATGAGT ACAAGAAAGG GCTTAGACCG GTTCTTTGGC TTTCAGAGAG ATTCCCATTA CAGACAAAAG AACTTCTTCC ATTGCTCGAT ATCCTTGCAA ACAAAGTCAA AGCAATTCGG CGTTTGAGAG AGCTTATGAC CACGAAACTA CCTTCGGGAA CATTCCCAGT CAAGGTTGCT ATTCCCGTAA TTCCTACGAT TAGAGTACTC GTCACATTTA CCAAGTTTGA AGAGCTAGAA GCTATTGAAG ATGAGTTTGT TACACCGCCA TCTAGTCCAA CTTATTCGGT GAAGAACAGT CCTAGAGAAG AAATACAGAG CTTATCAAAC TCATCCTCCT CATGGTTTCA ATGGATCAAA ACACCGAGCC AACGTCCATC AACAAGCTCG AGCTCTGCAG GGTTTAACAT TGGTAAAGCC GAAAACGATC AAGACCCATT TGCAATTCCA AGAGGATACA ATTGGATCAC AGCTGAAGAG AAGAAAAAGA AGGTCCAAGA GAAGAATAAA GCTAAGAAGG GCAAGTCATC TCAGAACAGC TGAAGAAAAA GAAAACACAA GTAAGAAAAG ATCTTTCTTT GTCTCTGAGA ACATAAATAC TCGAAGTAGG AAAAATCTAG CAGATTAAAA AGTGAAAAAC AAATCAAACC TTTTTCCTGG TTCTTGTACT AATAAACCAG GGGAAAAACA AATTCAATTA AATATAGCGG GGGAAATTGA GGGAATGATG TGGGTTAATG TTGTTGTGAC TTTAT 
Length2325
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1532022.. 1534429
Download Sequence
A.thaliana
AGI-codeAT1G04780.1
DescriptionAnkyrin repeat family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg487067 ubiquitin-protein ligase 4
12.6491 Ahg488676 novel cap-binding protein
16.7033 Ahg485232 serine palmitoyltransferase 1
17.0294 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
19.2354 Ahg473775 VIRE2-interacting protein 1
19.8997 Ahg328336 RING/U-box superfamily protein
20.3715 Ahg331396 Protein of unknown function (DUF1682)
28.9828 Ahg472236
29.2233 Ahg489474 Major facilitator superfamily protein
32.1714 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression