Detail



ID : Ahg331396

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|331396|fgenesh1_pm.C_scaffold_8000739
Sequence
ATGCAATTGC TGACGCTAAA CCCGCCGGCC ATTTCCAGGA CGCCGCCGCA AGCCCTAGAC CCTTCCTCTT CCTCGAGACT TCTTCCTTCT CCTCAGATTT TGAGCTCCCA ACGCGCTCTT AGTCTTGTTG CTAGGCCTTG TAATCCACTT CGACGAGGAT TATCTAGGTC TTTATCAAGT CGACAACTTT TCCGACGATC GAAAGTTGTC AAGGCAGTAG CAACCCCAGA CCCAATCTTG GAAGTACCCC TAACTGAGGA AAATGTAGAA AGCGTTTTGG ATGAACTCCG ACCATACCTT ATGTCTGATG GTGGTAATGT GGCATTACAT GAGATCGATG GAAATATTGT GCGAGTTAAG CTGCAGGGAG CATGCGGATC ATGCCCAAGT TCTACTATGA CGATGAAGAT GGGAATTGAG CGTCGTCTAA TGGAAAAAAT CCCTGAAATA GTGGCTGTGG AAGCAGTTCC AGATGAAGAG ACTGGCCTTG AACTGAATGA GGAAAACATT GAAAAGGTGC TGGAAGAAAT CAGGCCATAC TTGATCGGAA CAGCAGATGG ATCGCTTGAT CTAGTGGAAA TCGAAGATCC AATCGTGAAG ATAAGAATCA CAGGACCTGC AGCTGGAGTG ATGACAGTTC GAGTAGCAGT CACTCAGAAA CTAAGAGAGA AAATCCCCCG ATCTTTCTCA TTCGCTCTCA TTTTCTACCT CTTCCTCCAT TATCGTATCA TCGTAGCTTC ACAATTCGAA GGATTTGATG CTGAAGAAGA CGATGTTTCC GACGATTCCT CTCACCTTCC TCACCACTCC CTCCCTCCGC CTCTTCTCAC TCAGTCTCAC TCATCACTCT CCGATCTGGA ACCGGAACCG GAACCGGAAT CTTCTTCTGC CGAATCTAAC TCTGATCTCA TCTCTGAATC AGATCCCGAG CATGAATCCG ATTCGAGAAC TCCCTCGTCT ACGCCATTTG AGTACTGGGA CGAAGACGAG TTCGAGGGAC TACCGATTGA GATAGAGACA CTTGAATCTC CATTGATTGC AGAAAACGCA ACTCATACTG ATCCAAAGAC GCTAGATCTC AAGACTTCAT CGGAACCTCA AGAAGTAACT ACTGATCAGA TGAAGAAGAA GAAGTCGTAC GCGGTGGAGA TCGCTTGCGT CGTTTTCTTA ATCGCTCTCG CAATCAACTA CTTCGTTGGT AAACGTGAGA ACGAGAGTCT CGCTTTAGCT TGGGCGGCGA AATTCGCTTC CAAGGGTACT ATATTCCAGA AGAATTTTAG TTTGCTTGGA GTTAGTGAAG GAGAGGATTC GCCATTGTTG TTGAAAGAAG CGTTAAATGT GTTTAAATTC TACGCGAGTG GTCGTAGGTA TTGCCATGGA TTGTTAGCTA CTATGGAGCT TAAGAGTAGA CATGATTTGA TCTCTAGGAT GTTTAATTTG GTGGTTCCTT GTAAAGATGA GATCACTTTT GAGGTTTATA TGAATGAAGA TACTATGGAT CATGTTGTGT TTGCGATGGC GAGGAAAAAG GCTGCGAAAA CTATGCAAAA GGAGATGAGG GATTTGCAGA GATTCACTGG GATTGTGTCT CCTCCTGCTG GGAGGAAATG GGTGTCGGAG GAGTTAGCTG TGATCTCTGA ATCCAAGGAA GTTGCTGCGG ATATGATCAC TGACACTGTT CTTGATCAGG TTTTTGGTGA CAAGGCTGTG GATAAGTATG GGAAGAATTT CATGTCGATG CATATATCTG ACCAACACCC TGGCAAGCAC AAGAAGATGA TGCTTTTCAA GTTTTCCTTA CCCGATGCTA AACATATGGA TGATATTGTC CGCTTGGTGG CGCTAATTCC ATATTACATC GACTTAGTAG GTCGATACAG ACTCAGCTCC CAGGCGCGGA ACAAAACTGA GAGTGGTAGG CAAAAGGCAG CAGAGGAAGC ATACAAGGAA CTTCAGAACG CGAGGCAAGA GGCATTGCAG AAGAAGAAAG CAGAAAAGAA GAAAATGATG GAGGAAGCGG AAGCAAAGCT GAGCGCAGAA GTGATAAGGA AGAAAGAGGC AAAAGAAAGA GCAAGGCAGG TGAAAAAGGC AGTACCAAAA ATGAAGATGA GCCGTAGTCA CTAG 
Length2124
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12825825.. 12829939
Download Sequence
A.thaliana
AGI-codeAT5G49945.1
DescriptionProtein of unknown function (DUF1682)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.4356 Ahg492738 PapD-like superfamily protein
19.8242 Ahg929332 metallothionein 3
20.3715 Ahg470463 Ankyrin repeat family protein
20.7123 Ahg493816 ubiquitin conjugating enzyme 8
27.4955 Ahg490084 malonyl-CoA decarboxylase family protein
27.55 Ahg492720 oxidoreductase, zinc-binding dehydrogenase family protein
27.5681 Ahg480666
35.3129 Ahg485539 acyl-CoA oxidase 4
36.8782 Ahg902749 cytochrome P450, family 709, subfamily B, polypeptide 2
48.0625 Ahg478672 myb-like HTH transcriptional regulator family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression