Detail



ID : Ahg490641

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490641|fgenesh2_kg.7__74__AT4G38770.1
Sequence
CATATCCTCA CCTTCTCCAC TAATACTCTA TTTATCATAT AGTTTTTTTG TTGTTCTTAT AAACTTTATA TTTTCAGCAA ACGAAAGAGA AGTGTGTCAG AACTCTCAGA GGGTGAGAAT CCCAATGAGG ATCTTACCCG AACCTCGAGG TTCGATTCCG TGCCTTCTCC TTCTCGTGTC GGTTCTCTTT TCAGCGACTC TCACACTCGC TCGTGTCGTC GAAGTTGTCG GTTACGCCGA GAGCAAGATC AAAACCCCCC ATGCATTTTC AGGACTCCGA GTGACGATCG ACTGTAAGGT AAATAAAGGC CATTTTGTTA CAAAAGGTTC CGGAAACATT GACGACAAAG GAAAATTTGG TCTTAATATT CCTCATGACA TTGTCTCCGA CGATGGAGCG TTGAAGGAGG AGTGTTACGC TCAGCTTCAC AGCGCGGCGG GAACCCCTTG TCCGGCTCAC GACGGCCTTG AATCCACCAA GATCGTGTTT TTATCCAAAT CCGGGGATAA ACACGTTTTG GGTCTCAAAC AAAATCTGAA ATTTTCACCC GAAATTTGCG TTTCGAAATT CTTCTGGCAT ATGCCTAAGT TGCCTCCTTT TAAGGGCTTT GATCATCCGT TCCCTTTACC TCCACCTTTG GAACTTCCAC CGTTTCTCAA GAAGCCATGT CCACCTAAAT TCAGCCCTCC TGTGGAGGTT CCACCTCCGG TTCCGGTTTA CGAGCCACCG CCAAAGAAAG AGATTCCGCC TCCGGTTCCG GTTTACGATC CACCGCCAAA GAAAGAGGTT CCCCCACCTG TCCCGGTTTA CGAGCCACCA CCAAAGGTGG AGCTTCCACC GCCTATTCCT AAGAAGCCTT GTCCACCTAA ACCGCCGAAG ATAGAGCACC CACCTCCGGT TCCGGTTTAC AAGCCACCGC CAAAGATAGA GCACCCACCT CCAGTTCCGG TTTACAAGCC ACCGCCAAAG ATAGAGCACC CACCTTCGAT AGAGCACCCA CCTCCAGTTC CGGTACACAA GCCACCGAAG AAGCCATGTC CGCCTAAGCC GCCGAAGGTG GAGCTTCCAC CGCCGGTGCC AGTCTACAAA CCACCAACGA AGAAGCCTTG TCCGCCTAAA CCGCCGAAGA AAGTTGATCC ACCGCCGGTT CCAGTCCACA AGCCGCCGCC AAAGATAGTC ATTCCACCGC CGAAGATAGA GCACCCACCT CCGGTTCCGG TTTACAAGCC GCCGCCGAAG ATAGAGCATC CACCAATCTA CATACCACCA GTAGTGATCC CGAAGAAGCC GTGTCCTCCG CCGGTACCAG TATACAAACC ACCGGTGGTG ATTCCGAAGA AGCCGTGTCC TCCGCCGGTA CCAGTATACA AACCACCGGC GGTGATACCA AAGAAGCCAT GTCCGCCACT TCCACAGCTT CCACCACTTC CAAAGTTTCC ACCTCTTCCT CCTAAATACA TTCACCACCC CAAGTTCGGG AAATGGCCTC CACACCCTTG AGAAAATTAA ATACGTATAT ATATATATAC GTATACTCAT GTATAATCAA CGTGTTGCCT TTTTAATACT TTATCTTTGC ATGTTCTCTT TATATTTTGT TTCTTTTGTT GGCTTTCCCT CTGAGTTATC TTATATGTGT AGACTGTTTG TTTATATTCC CGCAATATTC TTCCAACAAT AATATGGTAA TGATACGTTT CTCTTTT 
Length1707
Protein Sequence
Protein Residue
Map Locationscaffold_7: 217891.. 219724
Download Sequence
A.thaliana
AGI-codeAT4G38770.1
Descriptionproline-rich protein 4
TAIR curator summaryEncodes one of four proline-rich proteins in Arabidopsis which are predicted to localize to the cell wall. Transcripts are most abundant in aerial organs of the plant.
Alias[ATPRP4][PRP4][ARABIDOPSIS THALIANA PROLINE-RICH PROTEIN 4][proline-rich protein 4]
Gene coexpression
MR
MR Locus Description
2 Ahg470596 Chitinase family protein
3.60555 Ahg473204 chlorophyll A/B binding protein 1
4.58258 Ahg945300 early nodulin-like protein 2
4.89898 Ahg904619 Pollen Ole e 1 allergen and extensin family protein
4.89898 Ahg476393 germin-like protein 1
4.89898 Ahg473169 GDSL-like Lipase/Acylhydrolase superfamily protein
5.09902 Ahg473203 chlorophyll A/B-binding protein 2
7.34847 Ahg479089 GDSL-like Lipase/Acylhydrolase superfamily protein
8.94427 Ahg480276 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
9.48683 Ahg930186 cell wall-plasma membrane linker protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression