Detail



ID : Ahg490272

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490272|fgenesh2_kg.6__3406__AT4G02880.1
Sequence
TGTTTCTCAC AATTCTCAAA ATCTCTCATC CGAATTGCTG CGCCTTTTCC GCTTCCTTTA CTCTGTCAAA TCTCTCACCG GAAAAATCTC GGAAAGGTTC GTGTGATCCA ATTCTGAGAA TTTGAAAAAC CCACCGAGAA ATTCGAGATT TAGTTGATTT TTTCACTGAT GGGTTACAAA GCGGTTTATC GATCTCTCAC TGAATTGTTT CCTCAGATTG ATGCAAGGCT TTTAAAAGCT GTTGCTATTG AGCACCCAAA GGATGCTAAT GAAGCTGCAG CTGTAGTTGT TTCAGAGATT GTTCCTTTCT TTTACCCTAA TTTGGCTGAT AATTCTACAC AACCTGAGAA CAGGTCACCC GGAAATGTGC CTAACAAAGT AGAACGTGCT ATGCAAAACG GTGTGTTGTC TGGTTCAGAG ACAGGTTCTT CTTCCTCTTC AGGAAGTATC CCTCTGGCTG TTGATTGTGA TCATGAAACA AGGGCCCCAA TTACTGAATC AATTTCTAGT AGGAACCAGT TGACACATGT TATGCCAAAT GTTGATCTTG ATATTCAGAG CAACGCAAAG ATCGGGTTGA GCGGATCGGA AGAGTCTGGA GTGGTTTCCT CAGAAAACCC CGTCTCTTTT CAGGCGGGAG CTAAATCGAC TAGCCATGGT TGTCAAGGTG TTGGGTTTCA CATTACAGGT AGTAATCTAG CAGAAGCTAG CACAAGCTCA GAGTCAGAAG ATGCTGTGCA TAAGCTGGTT TATCCTGCAG ACAATTCGGC AATGACACAG AAATCACCTC CTCTTCAAAT TAGATTTGGG AGTATCGATA TTGTGAACGA GACATCAAGT GGTTCATTGG CTGTTGAAAA TAGCGATGCA GAGTTGAGTG GTTCAAATCT TGTGGATGTG ACATCAAAGG GCTCTTTGGC AGTTGAAAAT GGTGATCCAG AGCTGGTTGG TGCTTTTAGC TCTGTTGTTA GCAGATCAAC CCAGGGATGC AACATTGTCC ACCTTGAACA GATCATTGAA GATGCCAAAA GTAACAAGAA AACCTTGTTC ACTGTGATGG AGTCGATTAT GAATCTGATG AGAGAAGTTG AACTTCAAGA AAAGGATGCA GAAAAGGCAA AGGAAGATGC TTCTAGAGGA GGCTTTGATA CTCTTGACAA GGTGGAGGAG CTGAAGAAGA TGCTGGAACA TGCGAAGGAG GCAAATGACA TGGATGCTGG AGAAGTTTAT GGGGAGAGGT CAATTTTGAC CACTGAAGTT AACGAGCTTG AAAATCGCTT GCTCAACTTA TCAGAGGAAC GAGACAAATC TCTTTCTGTT CTTGATGAGA TGCGTGAAGT TCTTGAAATA AGACTAGCGG CAGCGCTGGA GATAAAAAAT GCTGCTGAGC AAGAAAAGCA GGAAAAAGAA GGGTCTGCAC GCAAGGCATT TGCTGAACAA GAAGCGATCA TGGAAAAAGT TGTCCAAGAA TCAAAGCTTC TACAGCAAGA GGCAGAAGAA AACTCCAAGC TGCGAGAGTT TCTTATGGAT CATGGTCGGA TTGTTGATTC CTTACAAGGA GAAATCTCTG TGATCTGTCA AGACATCCGA CACTTGAAAG AGAAATTCGA CAACCGAGTG CCATTGAGCC AATCAATTAC CTCAAGCCAG ACTAGCTGTA AACTGGCTTC TTCCGCATCA TCCATGAAGA GCTTATTGCT GGAGAAGCCT TTGGAGGCAT CTTATGAAAC AGCTGAAGCC TCGAGCAACA ACACGAGCCC AAAAGCTTTG GTTAACGAGG GAAAAGATGA TCGTAAGGAG CTTCTGGAAG AGGGCTGGGA CTTTTTTGAC AAAGAGACAG AGCTCTAAGT GTCTTCATTA CAGAAGATTT CATCAGTTTT AAGAATAAAA GAGATATGAA GGGCTTTTGG GTCGTGCTCT ATATAGAGTA AAGCTTGGAT CTTTGAGCTA ATCTACCATT AGTGTAAACA TCTATTGAGC TCTTTATTAT TTTTCTTCT 
Length1999
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21985943.. 21989399
Download Sequence
A.thaliana
AGI-codeAT4G02880.2
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg487697 transducin family protein / WD-40 repeat family protein
8.12404 Ahg470606 cell division cycle protein 48-related / CDC48-related
9.79796 Ahg933239 Ring/U-Box superfamily protein
10.9545 Ahg494872 nitrile specifier protein 5
11.8322 Ahg494081 transporter associated with antigen processing protein 2
12.6491 Ahg934753 Integral membrane Yip1 family protein
15.0997 Ahg919449 UDP-glucosyl transferase 71C4
19.4422 Ahg890655 TOPLESS-related 2
21.0238 Ahg952367 SPFH/Band 7/PHB domain-containing membrane-associated protein family
22.383 Ahg486585 26S proteasome, regulatory subunit Rpn7;Proteasome component (PCI) domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression